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The map label for this gene is ydeD [C]

Identifier: 34497986

GI number: 34497986

Start: 2722618

End: 2723577

Strand: Reverse

Name: ydeD [C]

Synonym: CV_2531

Alternate gene names: 34497986

Gene position: 2723577-2722618 (Counterclockwise)

Preceding gene: 34497988

Following gene: 34497977

Centisome position: 57.33

GC content: 66.77

Gene sequence:

>960_bases
TTGTTTACATCCACCGCCATGCCCGCCATTCATTCCCAACGCAACGCCTACATCCTGCTGGTGCTGACCATGCTGATGTG
GTCCACCAATTTCATCATCGCCCGCGCGCTGCACGCCGAGCTGGGGCCGTTCACGCTGGCCTTCGCCCGCTGGGGCATCG
CCCTGGCCTGCGTGCTGCCGTTCGCGCTGCCCAGGCTGCGCCGCAACTGGAGCCAGCTGCGCGCGCAGTGGCCGCTGCTG
CTAGTGCTGGGCCTGTTCGGCATCGGCCTGACCAATACCTTCGTCTACCGGGCATTGCAGACCACCACCGCCACCAATGC
GGTGATCCTGAACAGCGCGACGCCGGTGATGGTGCTGCTGCTGGGATCGCTGTATTTCCGCCAGCGGCTGAGCAGCCGGC
AATGGATGGGCATGACGCTGGCGCTGTGCGGCGCGTTGTTGATCGTGCTGAAGGGCAAGCTGCTGGAGATCGGCGGCTTC
CATTTCGGCGGCGGCGATCTGTTCGTGCTCGCCGGCGGCCTGAGCTGGGCCATTTACACGCTGGGCCTGCGCAAATTGAA
GCCGGGCATCGATCCCATGGTGCAGATGGCGGCGCTGCTGCTGGTGGGCGAGGCCGTGCTGCTGCCGTTTTTCCTGGGCG
AACTGTCGTCGCGCGGCTTGCCCTCGCTGGACGCAGGCGCGGCCGCCAGCCTGCTGTACCTGGGCGCGCTGCCCTCGGTC
GTCGCTTACCTGTTGTACAACCGCGCGATCGCGATGGTGGGCACGGCCAAGGCGGCCGCTTTCCTGTACCTGATGCCGGC
CTTCGGCGCGATGCAGTCCATCTGGCTGCTGGGAGAGGAGCTGCACTGGTATCACGTGGCTGGCTTGGCCGCCATCTTCG
GCGGCATCGCGCTCAGTTCGCTGAGCCGCGGCGCGGCGAGGGAGAACGCCGGAGCGGCGTTGCGGGCGAAAGAGTCCTGA

Upstream 100 bases:

>100_bases
AACTTTTCTTTCGCTTGCATTTGTGTGGTTATTTTTATGTTCCATTGCTTTGTTATTTATTAAAATAATATGCTTTTGAA
TTGTTGTAAAATGGCACAAA

Downstream 100 bases:

>100_bases
GCCGGCAGGCCAGGCTGAAACGGGAAGGCGGCGCGGAAAGCGCCGCCTTTTTCATGGCCGGAGATATCGGTCAGGTCAGA
TACAGCAGCAGCGGCATCGC

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MFTSTAMPAIHSQRNAYILLVLTMLMWSTNFIIARALHAELGPFTLAFARWGIALACVLPFALPRLRRNWSQLRAQWPLL
LVLGLFGIGLTNTFVYRALQTTTATNAVILNSATPVMVLLLGSLYFRQRLSSRQWMGMTLALCGALLIVLKGKLLEIGGF
HFGGGDLFVLAGGLSWAIYTLGLRKLKPGIDPMVQMAALLLVGEAVLLPFFLGELSSRGLPSLDAGAAASLLYLGALPSV
VAYLLYNRAIAMVGTAKAAAFLYLMPAFGAMQSIWLLGEELHWYHVAGLAAIFGGIALSSLSRGAARENAGAALRAKES

Sequences:

>Translated_319_residues
MFTSTAMPAIHSQRNAYILLVLTMLMWSTNFIIARALHAELGPFTLAFARWGIALACVLPFALPRLRRNWSQLRAQWPLL
LVLGLFGIGLTNTFVYRALQTTTATNAVILNSATPVMVLLLGSLYFRQRLSSRQWMGMTLALCGALLIVLKGKLLEIGGF
HFGGGDLFVLAGGLSWAIYTLGLRKLKPGIDPMVQMAALLLVGEAVLLPFFLGELSSRGLPSLDAGAAASLLYLGALPSV
VAYLLYNRAIAMVGTAKAAAFLYLMPAFGAMQSIWLLGEELHWYHVAGLAAIFGGIALSSLSRGAARENAGAALRAKES
>Mature_319_residues
MFTSTAMPAIHSQRNAYILLVLTMLMWSTNFIIARALHAELGPFTLAFARWGIALACVLPFALPRLRRNWSQLRAQWPLL
LVLGLFGIGLTNTFVYRALQTTTATNAVILNSATPVMVLLLGSLYFRQRLSSRQWMGMTLALCGALLIVLKGKLLEIGGF
HFGGGDLFVLAGGLSWAIYTLGLRKLKPGIDPMVQMAALLLVGEAVLLPFFLGELSSRGLPSLDAGAAASLLYLGALPSV
VAYLLYNRAIAMVGTAKAAAFLYLMPAFGAMQSIWLLGEELHWYHVAGLAAIFGGIALSSLSRGAARENAGAALRAKES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34283; Mature: 34283

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTSTAMPAIHSQRNAYILLVLTMLMWSTNFIIARALHAELGPFTLAFARWGIALACVLP
CCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FALPRLRRNWSQLRAQWPLLLVLGLFGIGLTNTFVYRALQTTTATNAVILNSATPVMVLL
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
LGSLYFRQRLSSRQWMGMTLALCGALLIVLKGKLLEIGGFHFGGGDLFVLAGGLSWAIYT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCEEECCCCEEEEECCHHHHHHH
LGLRKLKPGIDPMVQMAALLLVGEAVLLPFFLGELSSRGLPSLDAGAAASLLYLGALPSV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VAYLLYNRAIAMVGTAKAAAFLYLMPAFGAMQSIWLLGEELHWYHVAGLAAIFGGIALSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRGAARENAGAALRAKES
HHHCCCCCCCCCCEEECCC
>Mature Secondary Structure
MFTSTAMPAIHSQRNAYILLVLTMLMWSTNFIIARALHAELGPFTLAFARWGIALACVLP
CCCCCCCCHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FALPRLRRNWSQLRAQWPLLLVLGLFGIGLTNTFVYRALQTTTATNAVILNSATPVMVLL
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH
LGSLYFRQRLSSRQWMGMTLALCGALLIVLKGKLLEIGGFHFGGGDLFVLAGGLSWAIYT
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEECCEEECCCCEEEEECCHHHHHHH
LGLRKLKPGIDPMVQMAALLLVGEAVLLPFFLGELSSRGLPSLDAGAAASLLYLGALPSV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
VAYLLYNRAIAMVGTAKAAAFLYLMPAFGAMQSIWLLGEELHWYHVAGLAAIFGGIALSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRGAARENAGAALRAKES
HHHCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]