| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497945
Identifier: 34497945
GI number: 34497945
Start: 2680826
End: 2681341
Strand: Reverse
Name: 34497945
Synonym: CV_2490
Alternate gene names: NA
Gene position: 2681341-2680826 (Counterclockwise)
Preceding gene: 34497946
Following gene: 34497944
Centisome position: 56.44
GC content: 70.35
Gene sequence:
>516_bases ATGGCCAGCCGTCGTCAATTCCTGAAGGCGGGCGCGCTGGGAAGCGCCGCCCTGCTGTTGGCTGGCTATTGGGCCGCCCC GGCAAAGGATCCCGATCCTGCCGCGGCCCGCGCGCTGCGATGGCTGAGTCCGCTCGACGCCCAGATCGTCGCCGCGTTGG CTCCGGTGCTGCTGGGCCTGCCCGGCGTGCCTTCGGCCAGCGTGGTGGACGGCGTGGACCGCGCGGTGGAGGGTTTGCCG TTCGAGACGCGGCGCGAGGTGCGCCAACTGTTCGATCTGCTGGGCAACCGCTGGGCCCGTCGCTGGCTGGCCGGCGTACG CTCGCCCTGGCAGCTTGCTTCCGCGCGGGAACTAGGGCAGTTCCTGCAGCGCTGGCGCGAGAGTCGCTTCGCCTTGCAAT GCAGCGCCTACCAGGGCCTGCACCGGCTGATCCATGCCGGCTGGTACGGCAATCCCGCCAGCTGGGCCGCATTGGGTTAT AACCAGCCGGCGGCGGTGATGGGGATGCTGCCTTGA
Upstream 100 bases:
>100_bases AAGCCGGTGTTCCGCCAGAGCCGGCTGTCCGGCGCCTGGCTGACCCGGCCGCCGTATGGCGCGGCGGTGGAATGGCTGCT CAAGCTGATGCTGCGTTGAC
Downstream 100 bases:
>100_bases GCGGAAAGATACCCGATCCGATCCGGGCAGGTTTGGCCAGCGGCTGGAAGGCGATGGATGGGGCGAAGCAAGACAAGGAC CTGTCCTTGGCGGCGGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MASRRQFLKAGALGSAALLLAGYWAAPAKDPDPAAARALRWLSPLDAQIVAALAPVLLGLPGVPSASVVDGVDRAVEGLP FETRREVRQLFDLLGNRWARRWLAGVRSPWQLASARELGQFLQRWRESRFALQCSAYQGLHRLIHAGWYGNPASWAALGY NQPAAVMGMLP
Sequences:
>Translated_171_residues MASRRQFLKAGALGSAALLLAGYWAAPAKDPDPAAARALRWLSPLDAQIVAALAPVLLGLPGVPSASVVDGVDRAVEGLP FETRREVRQLFDLLGNRWARRWLAGVRSPWQLASARELGQFLQRWRESRFALQCSAYQGLHRLIHAGWYGNPASWAALGY NQPAAVMGMLP >Mature_170_residues ASRRQFLKAGALGSAALLLAGYWAAPAKDPDPAAARALRWLSPLDAQIVAALAPVLLGLPGVPSASVVDGVDRAVEGLPF ETRREVRQLFDLLGNRWARRWLAGVRSPWQLASARELGQFLQRWRESRFALQCSAYQGLHRLIHAGWYGNPASWAALGYN QPAAVMGMLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18654; Mature: 18523
Theoretical pI: Translated: 11.22; Mature: 11.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRRQFLKAGALGSAALLLAGYWAAPAKDPDPAAARALRWLSPLDAQIVAALAPVLLGL CCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC PGVPSASVVDGVDRAVEGLPFETRREVRQLFDLLGNRWARRWLAGVRSPWQLASARELGQ CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FLQRWRESRFALQCSAYQGLHRLIHAGWYGNPASWAALGYNQPAAVMGMLP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCC >Mature Secondary Structure ASRRQFLKAGALGSAALLLAGYWAAPAKDPDPAAARALRWLSPLDAQIVAALAPVLLGL CCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCC PGVPSASVVDGVDRAVEGLPFETRREVRQLFDLLGNRWARRWLAGVRSPWQLASARELGQ CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FLQRWRESRFALQCSAYQGLHRLIHAGWYGNPASWAALGYNQPAAVMGMLP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA