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The map label for this gene is recJ [H]

Identifier: 34497930

GI number: 34497930

Start: 2662565

End: 2664253

Strand: Reverse

Name: recJ [H]

Synonym: CV_2475

Alternate gene names: 34497930

Gene position: 2664253-2662565 (Counterclockwise)

Preceding gene: 34497931

Following gene: 34497929

Centisome position: 56.08

GC content: 67.44

Gene sequence:

>1689_bases
ATGTCGCAAATCGTTACCCGCGAAGTGCCCGCCGAACTGCAGCAAAAGCTGCTCGGCCAGGGCCTGACCCCGCTGCAGGC
GCGGCTGTACGCCGCCCGCGGCATCGCCGACAGCGAAGAGCTGGACTACGGCCTGAAGGGCCTGCTGCCTTATCAAAAAC
TGAAGAACGTCGAAGCGATGGCCAGCCGCCTGGCCGACGCCATCGCCGCCAAGCAGCGCCTGCTGGTGGTCGCCGATTAC
GACGCCGACGGCGCCACCGCCTGCGCGGTGGCGGTGAAGGGCCTGTCCATGCTGGGCGCCATCATCGGCTTCATCGTGCC
CAACCGCTTCGAGTACGGTTACGGCCTGACGCCGGAAATCGTCGAACTGGCGGCGCAGAAACGGCCGGACATCATCGTCA
CCGTCGACAACGGCATCGCCAGCGTCGCCGGCGTGGAAGCGGCCAAGGCGCGCGGCATCGAGGTGCTGGTCACCGACCAC
CACTTGCCGGGCGACACCTTGCCGGAGGCGCTGATCGTCAACCCCAACCAGCCCGGCTGCGAGTTTCCGTCGAAAAACCT
GGCCGGCGTCGGCGTGATGTTCTACGTGTTGATGGCTTTGCGGGTGGAGATGCGCCGGCGCGGCGTGTTCGACGAGCAGA
CCCAGCCCAATCTGGGCGTGCTGCTGGACCTGGTGGCGCTGGGCACGGTGGCGGACGTGGTGCGGCTGGACCGCAACAAC
CGCACGCTGGTGGAAAACGGTCTCAAGCGCATGCGGGCCGGGCGGATGGCGCCCGGCATCGCGGCATTGTTCCGCGTCGC
CGGCCGCGCCCACTACAAGGCCAACACCTTCGATCTGGGCTTCACCCTGGGGCCGCGGCTGAATGCCGCCGGCCGGCTGG
ACGACATGAGCCTGGGCATCGCCTGCCTGTTGGCGAGCAATGAAGAGCAGGCGATGCGGCTGGCGCAGGAGCTGGACAAG
CTCAACCGCGAGCGGCGCGGCATCGAGGCCGGCATGCAGGACGAGGCGCTGGCGGCGCTGTCCGGCATCGACGCCGGCAA
CCGCTACACGCTCAGCCTGTACCGCGATGACTGGCACCAGGGCGTAGTGGGGATTGTGGCTTCCCGGTTGAAGGAGCGCT
TCCACCGGCCGGCCATCGTGTTCGCGCCGGGCGACGAGGGCGAGATCAAGGGTTCCGGCCGCTCGATTCCCGGCTTCCAC
CTGCGCGACGCGCTGGACCTGGTCTACAAGCGCCATCCGGGGCTGATTCTCAAGTTCGGCGGCCACGCGATGGCGGCCGG
CCTGAGCCTGGACGAAAGCCGCTTCGCCGAGTTCCAGCAGGCGTTCGAGGCGGTGGCGCGCGAGCTGCTGGACGAGAAGC
AGCTGACCCGGATGATAGAAACCGACGGCAGCCTGCCGGCGCGCGACCTCAGCCTGCAACTGGCCGAGACGCTGGCGGCT
GAGGTGTGGGGGCAAGGCTTCCCGGTGCCGTATTTCCACGACCAGTTCATGGTGGTGAATCAGAAACTGGTCGGCGACAA
GCACCTGAAGCTGCGCCTGGCGCGCGAAGGCTGCGAATTCGACGCGATGCTGTTCAACCATGCCGACTGGCTGCCGGACC
GCATCCAGGCGGTGTACCAGCTGATCGCCAACGAATGGCAGGGACGCAAGGAACTGCAGGTCTACCTGCAGCATTGGGCC
GCGGCCTGA

Upstream 100 bases:

>100_bases
CCACCGGCCCGGCCGGCTTCGAGCTGACGCTCAGGCCCGTCGACCTGTGGAAGTTCTGGAAACGCGCGCTGCCGCTGGCG
GCGCTGTACTAGAAGAAGAC

Downstream 100 bases:

>100_bases
TGCGGCCGGCGGACGGCGTGGAAGCGAAACCGCTGGTCCTGACCGGCGGCCCTGGGGCGGGGAAAACGTCCTTGCTGACG
ATGTTGGAAAACATGGGTTA

Product: exodeoxyribonuclease VII

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 562; Mature: 561

Protein sequence:

>562_residues
MSQIVTREVPAELQQKLLGQGLTPLQARLYAARGIADSEELDYGLKGLLPYQKLKNVEAMASRLADAIAAKQRLLVVADY
DADGATACAVAVKGLSMLGAIIGFIVPNRFEYGYGLTPEIVELAAQKRPDIIVTVDNGIASVAGVEAAKARGIEVLVTDH
HLPGDTLPEALIVNPNQPGCEFPSKNLAGVGVMFYVLMALRVEMRRRGVFDEQTQPNLGVLLDLVALGTVADVVRLDRNN
RTLVENGLKRMRAGRMAPGIAALFRVAGRAHYKANTFDLGFTLGPRLNAAGRLDDMSLGIACLLASNEEQAMRLAQELDK
LNRERRGIEAGMQDEALAALSGIDAGNRYTLSLYRDDWHQGVVGIVASRLKERFHRPAIVFAPGDEGEIKGSGRSIPGFH
LRDALDLVYKRHPGLILKFGGHAMAAGLSLDESRFAEFQQAFEAVARELLDEKQLTRMIETDGSLPARDLSLQLAETLAA
EVWGQGFPVPYFHDQFMVVNQKLVGDKHLKLRLAREGCEFDAMLFNHADWLPDRIQAVYQLIANEWQGRKELQVYLQHWA
AA

Sequences:

>Translated_562_residues
MSQIVTREVPAELQQKLLGQGLTPLQARLYAARGIADSEELDYGLKGLLPYQKLKNVEAMASRLADAIAAKQRLLVVADY
DADGATACAVAVKGLSMLGAIIGFIVPNRFEYGYGLTPEIVELAAQKRPDIIVTVDNGIASVAGVEAAKARGIEVLVTDH
HLPGDTLPEALIVNPNQPGCEFPSKNLAGVGVMFYVLMALRVEMRRRGVFDEQTQPNLGVLLDLVALGTVADVVRLDRNN
RTLVENGLKRMRAGRMAPGIAALFRVAGRAHYKANTFDLGFTLGPRLNAAGRLDDMSLGIACLLASNEEQAMRLAQELDK
LNRERRGIEAGMQDEALAALSGIDAGNRYTLSLYRDDWHQGVVGIVASRLKERFHRPAIVFAPGDEGEIKGSGRSIPGFH
LRDALDLVYKRHPGLILKFGGHAMAAGLSLDESRFAEFQQAFEAVARELLDEKQLTRMIETDGSLPARDLSLQLAETLAA
EVWGQGFPVPYFHDQFMVVNQKLVGDKHLKLRLAREGCEFDAMLFNHADWLPDRIQAVYQLIANEWQGRKELQVYLQHWA
AA
>Mature_561_residues
SQIVTREVPAELQQKLLGQGLTPLQARLYAARGIADSEELDYGLKGLLPYQKLKNVEAMASRLADAIAAKQRLLVVADYD
ADGATACAVAVKGLSMLGAIIGFIVPNRFEYGYGLTPEIVELAAQKRPDIIVTVDNGIASVAGVEAAKARGIEVLVTDHH
LPGDTLPEALIVNPNQPGCEFPSKNLAGVGVMFYVLMALRVEMRRRGVFDEQTQPNLGVLLDLVALGTVADVVRLDRNNR
TLVENGLKRMRAGRMAPGIAALFRVAGRAHYKANTFDLGFTLGPRLNAAGRLDDMSLGIACLLASNEEQAMRLAQELDKL
NRERRGIEAGMQDEALAALSGIDAGNRYTLSLYRDDWHQGVVGIVASRLKERFHRPAIVFAPGDEGEIKGSGRSIPGFHL
RDALDLVYKRHPGLILKFGGHAMAAGLSLDESRFAEFQQAFEAVARELLDEKQLTRMIETDGSLPARDLSLQLAETLAAE
VWGQGFPVPYFHDQFMVVNQKLVGDKHLKLRLAREGCEFDAMLFNHADWLPDRIQAVYQLIANEWQGRKELQVYLQHWAA
A

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=570, Percent_Identity=50.8771929824561, Blast_Score=517, Evalue=1e-148,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.11.6

Molecular weight: Translated: 61705; Mature: 61574

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQIVTREVPAELQQKLLGQGLTPLQARLYAARGIADSEELDYGLKGLLPYQKLKNVEAM
CCCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHCCCHHCCCCHHHHHHHHHH
ASRLADAIAAKQRLLVVADYDADGATACAVAVKGLSMLGAIIGFIVPNRFEYGYGLTPEI
HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VELAAQKRPDIIVTVDNGIASVAGVEAAKARGIEVLVTDHHLPGDTLPEALIVNPNQPGC
HHHHHHCCCCEEEEECCCCHHHHCCHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCCCC
EFPSKNLAGVGVMFYVLMALRVEMRRRGVFDEQTQPNLGVLLDLVALGTVADVVRLDRNN
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
RTLVENGLKRMRAGRMAPGIAALFRVAGRAHYKANTFDLGFTLGPRLNAAGRLDDMSLGI
CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECEEECCCCCCCCCCCCCCCCE
ACLLASNEEQAMRLAQELDKLNRERRGIEAGMQDEALAALSGIDAGNRYTLSLYRDDWHQ
EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCHHH
GVVGIVASRLKERFHRPAIVFAPGDEGEIKGSGRSIPGFHLRDALDLVYKRHPGLILKFG
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
GHAMAAGLSLDESRFAEFQQAFEAVARELLDEKQLTRMIETDGSLPARDLSLQLAETLAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EVWGQGFPVPYFHDQFMVVNQKLVGDKHLKLRLAREGCEFDAMLFNHADWLPDRIQAVYQ
HHCCCCCCCCCCCCCCEEECHHHCCCCHHEEEEHHCCCCCHHHHHHCCCCCHHHHHHHHH
LIANEWQGRKELQVYLQHWAAA
HHHHHCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQIVTREVPAELQQKLLGQGLTPLQARLYAARGIADSEELDYGLKGLLPYQKLKNVEAM
CCCHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHCCCHHCCCCHHHHHHHHHH
ASRLADAIAAKQRLLVVADYDADGATACAVAVKGLSMLGAIIGFIVPNRFEYGYGLTPEI
HHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
VELAAQKRPDIIVTVDNGIASVAGVEAAKARGIEVLVTDHHLPGDTLPEALIVNPNQPGC
HHHHHHCCCCEEEEECCCCHHHHCCHHHHHCCCEEEEECCCCCCCCCCCEEEECCCCCCC
EFPSKNLAGVGVMFYVLMALRVEMRRRGVFDEQTQPNLGVLLDLVALGTVADVVRLDRNN
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
RTLVENGLKRMRAGRMAPGIAALFRVAGRAHYKANTFDLGFTLGPRLNAAGRLDDMSLGI
CHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECEEECCCCCCCCCCCCCCCCE
ACLLASNEEQAMRLAQELDKLNRERRGIEAGMQDEALAALSGIDAGNRYTLSLYRDDWHQ
EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCHHH
GVVGIVASRLKERFHRPAIVFAPGDEGEIKGSGRSIPGFHLRDALDLVYKRHPGLILKFG
HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
GHAMAAGLSLDESRFAEFQQAFEAVARELLDEKQLTRMIETDGSLPARDLSLQLAETLAA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
EVWGQGFPVPYFHDQFMVVNQKLVGDKHLKLRLAREGCEFDAMLFNHADWLPDRIQAVYQ
HHCCCCCCCCCCCCCCEEECHHHCCCCHHEEEEHHCCCCCHHHHHHCCCCCHHHHHHHHH
LIANEWQGRKELQVYLQHWAAA
HHHHHCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]