| Definition | Chromobacterium violaceum ATCC 12472 chromosome, complete genome. |
|---|---|
| Accession | NC_005085 |
| Length | 4,751,080 |
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The map label for this gene is 34497908
Identifier: 34497908
GI number: 34497908
Start: 2638489
End: 2639265
Strand: Reverse
Name: 34497908
Synonym: CV_2453
Alternate gene names: NA
Gene position: 2639265-2638489 (Counterclockwise)
Preceding gene: 34497909
Following gene: 34497906
Centisome position: 55.55
GC content: 60.75
Gene sequence:
>777_bases ATGTCTGAAATGGGAAAATCCGTTGTCGTCACGCCAAGTTTGATGAGTAGCGGCGACAGGGAAAAACTGGTGGACGAATT ATATCTGGTGCATTGCGACATATTCGATGGCGTCAGCAAGGAGGATTTTGCCAACTATGTCGTGTATTCCAAGGCCAATG AAACGCGCATCCTGATTCACAAGAATATGCACGGGCAATCCGTCGGATACTGCGCGATCCATTTCTTCGAACAAGAACTC GAAGGCAAGCAATCCACCGTCATCCGCATGGAAGCCGGCCTGATGCGCGCTTACCGCGGCAAAAACCGCAACGCGCCCTT CGTCTGCCGCCAGGTGCTGGGCTACCGGTTGACGCATCCCGGCCGCCGCGTGTACTACCTGGGCGCGCTGGTCCACCCAT CCAGCTACATGCTGCTGGACAAATACGCGACCAAGGTATGGCCCAGCGAGCAGCAGTCCTCGGAACTGGATTATGGCGGC GTGATAGGTCAGCTGGCGCGTCTGTTCGGCCTCACGCCGGTAGACCCGGATACGCCCGGCGTCGTGCATGTCGGCTGGCA GACGCGGGACAACGACGGCGACCGTCGGCAATGGCAGGCCAGTTCCAGCCAGGCGGCGCAGTTCTACATCCGCCGCAACC CTGGCTATATCAAGGGGCATGGCCTGCTGACGCTGGTGCCGGTGACGCTGGGCTGCGTGGCCCACGCCACCGGGCGCATG CTGCTGAACCGGCTGAGCCAGCTGTTCGCCCCGCATCCGCACGGCAATCGCGGCTAG
Upstream 100 bases:
>100_bases AATTAACATTTATATCGAATATTTGCCGTTGCATTGCAATTAAATTCATATTTTTTGCAGTAAAAGCGATATTTTCCATT CGAATAAAATAGGGGCTAAC
Downstream 100 bases:
>100_bases GAGGAAGCCGGCGGGGCTTGCCCTGGCCGTCCCGCTGGAAATCCTCTGCCTGCGACAACCGCCCATCCGGAAAGGGACGC GGCGGATTCTCTCCAAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSEMGKSVVVTPSLMSSGDREKLVDELYLVHCDIFDGVSKEDFANYVVYSKANETRILIHKNMHGQSVGYCAIHFFEQEL EGKQSTVIRMEAGLMRAYRGKNRNAPFVCRQVLGYRLTHPGRRVYYLGALVHPSSYMLLDKYATKVWPSEQQSSELDYGG VIGQLARLFGLTPVDPDTPGVVHVGWQTRDNDGDRRQWQASSSQAAQFYIRRNPGYIKGHGLLTLVPVTLGCVAHATGRM LLNRLSQLFAPHPHGNRG
Sequences:
>Translated_258_residues MSEMGKSVVVTPSLMSSGDREKLVDELYLVHCDIFDGVSKEDFANYVVYSKANETRILIHKNMHGQSVGYCAIHFFEQEL EGKQSTVIRMEAGLMRAYRGKNRNAPFVCRQVLGYRLTHPGRRVYYLGALVHPSSYMLLDKYATKVWPSEQQSSELDYGG VIGQLARLFGLTPVDPDTPGVVHVGWQTRDNDGDRRQWQASSSQAAQFYIRRNPGYIKGHGLLTLVPVTLGCVAHATGRM LLNRLSQLFAPHPHGNRG >Mature_257_residues SEMGKSVVVTPSLMSSGDREKLVDELYLVHCDIFDGVSKEDFANYVVYSKANETRILIHKNMHGQSVGYCAIHFFEQELE GKQSTVIRMEAGLMRAYRGKNRNAPFVCRQVLGYRLTHPGRRVYYLGALVHPSSYMLLDKYATKVWPSEQQSSELDYGGV IGQLARLFGLTPVDPDTPGVVHVGWQTRDNDGDRRQWQASSSQAAQFYIRRNPGYIKGHGLLTLVPVTLGCVAHATGRML LNRLSQLFAPHPHGNRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28941; Mature: 28810
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMGKSVVVTPSLMSSGDREKLVDELYLVHCDIFDGVSKEDFANYVVYSKANETRILIH CCCCCCEEEEEHHHHCCCCHHHHHHHHHHEEEHHHCCCCHHHHCCEEEEECCCCEEEEEE KNMHGQSVGYCAIHFFEQELEGKQSTVIRMEAGLMRAYRGKNRNAPFVCRQVLGYRLTHP ECCCCCCCCHHHHEEHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC GRRVYYLGALVHPSSYMLLDKYATKVWPSEQQSSELDYGGVIGQLARLFGLTPVDPDTPG CCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC VVHVGWQTRDNDGDRRQWQASSSQAAQFYIRRNPGYIKGHGLLTLVPVTLGCVAHATGRM EEEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCEEECCCCEEEHHHHHHHHHHHHHHH LLNRLSQLFAPHPHGNRG HHHHHHHHHCCCCCCCCC >Mature Secondary Structure SEMGKSVVVTPSLMSSGDREKLVDELYLVHCDIFDGVSKEDFANYVVYSKANETRILIH CCCCCEEEEEHHHHCCCCHHHHHHHHHHEEEHHHCCCCHHHHCCEEEEECCCCEEEEEE KNMHGQSVGYCAIHFFEQELEGKQSTVIRMEAGLMRAYRGKNRNAPFVCRQVLGYRLTHP ECCCCCCCCHHHHEEHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCC GRRVYYLGALVHPSSYMLLDKYATKVWPSEQQSSELDYGGVIGQLARLFGLTPVDPDTPG CCEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC VVHVGWQTRDNDGDRRQWQASSSQAAQFYIRRNPGYIKGHGLLTLVPVTLGCVAHATGRM EEEEEEEECCCCCCHHHHHCCCCCEEEEEEECCCCEEECCCCEEEHHHHHHHHHHHHHHH LLNRLSQLFAPHPHGNRG HHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA