| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863579
Identifier: 33863579
GI number: 33863579
Start: 1398282
End: 1398929
Strand: Reverse
Name: 33863579
Synonym: PMT1311
Alternate gene names: NA
Gene position: 1398929-1398282 (Counterclockwise)
Preceding gene: 33863580
Following gene: 33863578
Centisome position: 58.03
GC content: 55.56
Gene sequence:
>648_bases GTGCTGTCAATCCCTTCGGCGACGGTCAGGCCAGCCGTCGCATTCTTGAGGCAAGTTGTGCATTCCTGGGCGTCTGAGGC TGCCTTTAGTTCTTGTGGTCACTACCGCTGGTGGTTGAAGCGCAGCCTTGGGCAATGCGAACGCACGTTGCTTTTCATTG GCTTGAATCCCTCCACCGCTACAGCGTCAGAGGATGATCCAACCTTGCGGCGGTTGCTGGGGTTTTGCCGCTCCTGGGGT TATGGACACCTTTTTGTTGTGAATCTATTTGCGCGGATCAGTCAATCCCCAGCGCTGCTTAGGCACTGTGCTGATCCGAT TGGTGATGCAAATGATGATCAGCTTTTGACTCGGGCACGCCAGTGGTCTGAGAGCCCTAATTGGGACCTTTGGTTTGGTT GGGGGTGCGGTGGAACTTTGCGTCGACGTGATCTTGCCGTCCAGGCTTTGTTGGAGCGTCATCGCCAGAACCGCATCAGC AATATCCCTGATGCTCGCGGCCCTCTCTCGCTTGGTTTGACGCGTGAGGGACACCCCTGCCATCCCCTTTACATGCCTGG CAAAGAGGTCCTTCGACCATTCAATTGGGCAAGTGGGGCAACTATCGGCCATCCTGAGTTGATGGACCTTGGTATTACGG TTCACTGA
Upstream 100 bases:
>100_bases GAAGCGGGTACGGCCAGGCTGGTTGGTACCGATCCGGAGATGATCGTGACTGAGACAGCTTCCTTGCTTGATGATTCAAG CGCCTACGAGGCGATGGCAC
Downstream 100 bases:
>100_bases TGACACGCACCCCACGCCGCTATGCGGTGTACCTCCATCTCTCCGGGGGGCAGACCGAAGAGGTTCATTTCCCTACTCTT GAGACGTTTCAGCAGTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MLSIPSATVRPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTATASEDDPTLRRLLGFCRSWG YGHLFVVNLFARISQSPALLRHCADPIGDANDDQLLTRARQWSESPNWDLWFGWGCGGTLRRRDLAVQALLERHRQNRIS NIPDARGPLSLGLTREGHPCHPLYMPGKEVLRPFNWASGATIGHPELMDLGITVH
Sequences:
>Translated_215_residues MLSIPSATVRPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTATASEDDPTLRRLLGFCRSWG YGHLFVVNLFARISQSPALLRHCADPIGDANDDQLLTRARQWSESPNWDLWFGWGCGGTLRRRDLAVQALLERHRQNRIS NIPDARGPLSLGLTREGHPCHPLYMPGKEVLRPFNWASGATIGHPELMDLGITVH >Mature_215_residues MLSIPSATVRPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTATASEDDPTLRRLLGFCRSWG YGHLFVVNLFARISQSPALLRHCADPIGDANDDQLLTRARQWSESPNWDLWFGWGCGGTLRRRDLAVQALLERHRQNRIS NIPDARGPLSLGLTREGHPCHPLYMPGKEVLRPFNWASGATIGHPELMDLGITVH
Specific function: Unknown
COG id: COG4333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24147; Mature: 24147
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIPSATVRPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCC TASEDDPTLRRLLGFCRSWGYGHLFVVNLFARISQSPALLRHCADPIGDANDDQLLTRAR CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHH QWSESPNWDLWFGWGCGGTLRRRDLAVQALLERHRQNRISNIPDARGPLSLGLTREGHPC HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCC HPLYMPGKEVLRPFNWASGATIGHPELMDLGITVH CCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCC >Mature Secondary Structure MLSIPSATVRPAVAFLRQVVHSWASEAAFSSCGHYRWWLKRSLGQCERTLLFIGLNPSTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCCC TASEDDPTLRRLLGFCRSWGYGHLFVVNLFARISQSPALLRHCADPIGDANDDQLLTRAR CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHH QWSESPNWDLWFGWGCGGTLRRRDLAVQALLERHRQNRISNIPDARGPLSLGLTREGHPC HHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCC HPLYMPGKEVLRPFNWASGATIGHPELMDLGITVH CCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA