| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is cbiJ [H]
Identifier: 33863532
GI number: 33863532
Start: 1353395
End: 1354216
Strand: Reverse
Name: cbiJ [H]
Synonym: PMT1264
Alternate gene names: 33863532
Gene position: 1354216-1353395 (Counterclockwise)
Preceding gene: 33863534
Following gene: 33863531
Centisome position: 56.17
GC content: 58.64
Gene sequence:
>822_bases ATGCAAGCTTGCAGGAATGACCAGCCGCATGTCTGGTTGCTATCTGGGACTGGTGAAGGACCTGTTTTGGTGGCCGCTTT GGTGGCTCAGGGATGGCGAGTCAGTGTCAGTGTCGTCAGTGCTAGCGCCGCAGGGGCCTACGCAGGTCTGTCCTTGGAAG ATCTTTGGACGGGCCCCCTCGACGGAGTGGAAGGGATACTCGGGGTGCTTGATCAGGCTCGTCATCGCCATCAAGGTTTT GATTGGGTGGTGGATGTGACCCATCCCTTTGCAGTCAAGATCAGTACGGATCTGCAGCGTGCCTGTCAGGAATTCGCTCA GCCTTTGTTGCGCTTTGAGCGTCCCATGGAGGGTTGTGGAGAAGCATCCCTGATCGCGAGCTCGGCTGATTTGGCAAGGC AAACATTGCAAGGAAGTCGATTGTTGATGGCTCTTGGGGCAAGGCATCTTGGCCAGGCTGTCAGGGCAGCTCGTCAGGCT GGAGCTCAAGTGTTTGCCCGTGTGCTTCCTTCGCCGGAAAGTCTTCGACATGCTTTGGCGAGTGGCTTGCCCGAGCACCA TCTGGCTGTTGTGCGTCCGCTGCAGGGGCAATCTCATGGCGAACTGGAGTCAGCCTTGTGCCGGCGCTGGTCGATTACAG CAGTGGTTTGCAGGCAGTCGGGGGGGGTGACGGAGCAGCTCTGGCACAAGATCTGTCGGCAGCAGGGGCTTGGCCTTTGG TTGATCTCCCGGCCACAGCCCTGCGGTGCAGTAGAAGCCATCGGTAGCGTTGAGAGCCTGCTCAATCGGCTCTCAACCGA TCGAGTAGCTCCACTGTGCTGA
Upstream 100 bases:
>100_bases GTTTGGTTGTCTTGGGTATAACGAATGGTTGGTGCCTGGATCACTTCCACTTCAAGTACGCAGTGGTTCATGTCCTTCCC TTGGAGTGAGAGTCATTTTG
Downstream 100 bases:
>100_bases CGTTCTTTGCAAAGGTCTTCATGGTTGATCGAGGATTCTCATCGACACTGGTTTTGGTGTTGACCACAGAGGCAAACGCA AACCTGGCCGAGGGATTGGC
Product: precorrin-6x reductase CbiJ/CobK
Products: Precorrin 6A; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MQACRNDQPHVWLLSGTGEGPVLVAALVAQGWRVSVSVVSASAAGAYAGLSLEDLWTGPLDGVEGILGVLDQARHRHQGF DWVVDVTHPFAVKISTDLQRACQEFAQPLLRFERPMEGCGEASLIASSADLARQTLQGSRLLMALGARHLGQAVRAARQA GAQVFARVLPSPESLRHALASGLPEHHLAVVRPLQGQSHGELESALCRRWSITAVVCRQSGGVTEQLWHKICRQQGLGLW LISRPQPCGAVEAIGSVESLLNRLSTDRVAPLC
Sequences:
>Translated_273_residues MQACRNDQPHVWLLSGTGEGPVLVAALVAQGWRVSVSVVSASAAGAYAGLSLEDLWTGPLDGVEGILGVLDQARHRHQGF DWVVDVTHPFAVKISTDLQRACQEFAQPLLRFERPMEGCGEASLIASSADLARQTLQGSRLLMALGARHLGQAVRAARQA GAQVFARVLPSPESLRHALASGLPEHHLAVVRPLQGQSHGELESALCRRWSITAVVCRQSGGVTEQLWHKICRQQGLGLW LISRPQPCGAVEAIGSVESLLNRLSTDRVAPLC >Mature_273_residues MQACRNDQPHVWLLSGTGEGPVLVAALVAQGWRVSVSVVSASAAGAYAGLSLEDLWTGPLDGVEGILGVLDQARHRHQGF DWVVDVTHPFAVKISTDLQRACQEFAQPLLRFERPMEGCGEASLIASSADLARQTLQGSRLLMALGARHLGQAVRAARQA GAQVFARVLPSPESLRHALASGLPEHHLAVVRPLQGQSHGELESALCRRWSITAVVCRQSGGVTEQLWHKICRQQGLGLW LISRPQPCGAVEAIGSVESLLNRLSTDRVAPLC
Specific function: Catalyzes the reduction of the macrocycle of cobalt- precorrin-6X into cobalt-precorrin-6Y [H]
COG id: COG2099
COG function: function code H; Precorrin-6x reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin-6x reductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003723 [H]
Pfam domain/function: PF02571 CbiJ [H]
EC number: 1.3.1.54
Molecular weight: Translated: 29298; Mature: 29298
Theoretical pI: Translated: 7.80; Mature: 7.80
Prosite motif: PS51014 COBK_CBIJ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQACRNDQPHVWLLSGTGEGPVLVAALVAQGWRVSVSVVSASAAGAYAGLSLEDLWTGPL CCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHCCCCHHHHCCCCC DGVEGILGVLDQARHRHQGFDWVVDVTHPFAVKISTDLQRACQEFAQPLLRFERPMEGCG HHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCC EASLIASSADLARQTLQGSRLLMALGARHLGQAVRAARQAGAQVFARVLPSPESLRHALA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SGLPEHHLAVVRPLQGQSHGELESALCRRWSITAVVCRQSGGVTEQLWHKICRQQGLGLW HCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCEE LISRPQPCGAVEAIGSVESLLNRLSTDRVAPLC EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MQACRNDQPHVWLLSGTGEGPVLVAALVAQGWRVSVSVVSASAAGAYAGLSLEDLWTGPL CCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHCCCCHHHHCCCCC DGVEGILGVLDQARHRHQGFDWVVDVTHPFAVKISTDLQRACQEFAQPLLRFERPMEGCG HHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCC EASLIASSADLARQTLQGSRLLMALGARHLGQAVRAARQAGAQVFARVLPSPESLRHALA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SGLPEHHLAVVRPLQGQSHGELESALCRRWSITAVVCRQSGGVTEQLWHKICRQQGLGLW HCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCEE LISRPQPCGAVEAIGSVESLLNRLSTDRVAPLC EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Precorrin 6B; NADP+
Specific reaction: precorrin-6B + NADP+ = precorrin-6A + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]