| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is hemH [H]
Identifier: 33863508
GI number: 33863508
Start: 1328046
End: 1329221
Strand: Reverse
Name: hemH [H]
Synonym: PMT1240
Alternate gene names: 33863508
Gene position: 1329221-1328046 (Counterclockwise)
Preceding gene: 33863515
Following gene: 33863507
Centisome position: 55.13
GC content: 52.89
Gene sequence:
>1176_bases ATGGCCCGGGTCGGTGTCCTCTTGATGAACCTAGGGGGGCCTGAACGTATCCAGGATGTAGGGCCTTTTCTCTTTAATAT TTTTGCCGATCCGGAGATCATTCGGCTGCCTAACCCCGCTCTTCAGAGGCCTTTGGCCTGGTTGATCAGCACGCTGCGCA GCAGTAAATCCGAGCAGGCTTACCGCTCAATCGGGGGCGGTTCACCTCTGCGGCGGATCACTGAACAACAGGCTCGGGAG TTGCAGAGCTTGCTTCGGCAACGCGGTATCGATGCCACGAGCTATGTGGCGATGCGTTATTGGCATCCATTCACAGAATC CGCTGTCGCAGATATCAAAGCTGATGGGATTGATCAGGTGGTGGTGCTTCCCCTCTACCCTCATTTTTCGATTAGTACCA GTGGCTCGAGTTTTCGAGAGTTGCAGCGCTTGCGACAGACGGATGAATCTTTCCGCAAGCTGCCAATACGTTGTATCCGC AGCTGGTACGACCACCCTGGATATGTTCGTGCCATGGCGGAGTTGATCGCTGAGCAGGTTCGGCTGAGTGATGTACCTGA AGAAGCTCAAGTGTTTTTTAGTGCTCATGGAGTGCCCAAGAGCTATGTCGAACAAGCAGGTGATCCATATCAGAAGGAGA TCGAGGCTTGTACGACTTTGATCATGGCTGAGCTGGAAAACCTTCTTGGCTATGGCAATCCTCATTCCCTTGCCTATCAA AGTCGAGTGGGTCCAGAGGAATGGATTCAGCCCTATACCGATCAAGTTATTGAGCAGCTTGGTGAGGCTGGTACACGTGA TTTAGTGGTTGTGCCGATCAGCTTTGTGAGCGAACACATCGAAACTCTCGCCGAGCTTGATATCGAATACCGCGAGCTGG CGACCGAAGCAGGAATTGTTCATTTCAGGCGGGTGCCTGCTCTTGATACTTACCCCACATTCATTGAGGGTTTGGCCGAT CTGGTTGGATCCAGTCTTGAGGGGCCAGAGATCAATCTCGATGAGGCTGCCAAGCTGGCCGGTCGAGTGAAGTTCTATCC CCAGGAGAGATGGCAATGGGGCTTGAATACCAGTTCTGAAGCATGGAATGGACGCATAGCCATGCTTGGGTTTGCGGCTT TTTTGTTGGAGCTGATCAGTGGCCATGGCCCTTTGCACGCGATCGGTCTGCTCTGA
Upstream 100 bases:
>100_bases TTGATTAGCTCGTTGCTCAGCTCCATGGCCTTGTAGGGATGGTGCCACCTTGGCGTTGATGGCAGCTACCCTCAAGTCCC TCTAAAGAACTCTCTTCTCT
Downstream 100 bases:
>100_bases GTGTTGGCTCGTTAAGGGTCGTCTCACTCTTCTGGTTGGTTCGTCTGTGGGATGACTGTTCTCAACGGAGTCCATTTGTA TTGGGGCATTCGCCCGCAGG
Product: ferrochelatase
Products: NA
Alternate protein names: Heme synthase; Protoheme ferro-lyase [H]
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MARVGVLLMNLGGPERIQDVGPFLFNIFADPEIIRLPNPALQRPLAWLISTLRSSKSEQAYRSIGGGSPLRRITEQQARE LQSLLRQRGIDATSYVAMRYWHPFTESAVADIKADGIDQVVVLPLYPHFSISTSGSSFRELQRLRQTDESFRKLPIRCIR SWYDHPGYVRAMAELIAEQVRLSDVPEEAQVFFSAHGVPKSYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQ SRVGPEEWIQPYTDQVIEQLGEAGTRDLVVVPISFVSEHIETLAELDIEYRELATEAGIVHFRRVPALDTYPTFIEGLAD LVGSSLEGPEINLDEAAKLAGRVKFYPQERWQWGLNTSSEAWNGRIAMLGFAAFLLELISGHGPLHAIGLL
Sequences:
>Translated_391_residues MARVGVLLMNLGGPERIQDVGPFLFNIFADPEIIRLPNPALQRPLAWLISTLRSSKSEQAYRSIGGGSPLRRITEQQARE LQSLLRQRGIDATSYVAMRYWHPFTESAVADIKADGIDQVVVLPLYPHFSISTSGSSFRELQRLRQTDESFRKLPIRCIR SWYDHPGYVRAMAELIAEQVRLSDVPEEAQVFFSAHGVPKSYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQ SRVGPEEWIQPYTDQVIEQLGEAGTRDLVVVPISFVSEHIETLAELDIEYRELATEAGIVHFRRVPALDTYPTFIEGLAD LVGSSLEGPEINLDEAAKLAGRVKFYPQERWQWGLNTSSEAWNGRIAMLGFAAFLLELISGHGPLHAIGLL >Mature_390_residues ARVGVLLMNLGGPERIQDVGPFLFNIFADPEIIRLPNPALQRPLAWLISTLRSSKSEQAYRSIGGGSPLRRITEQQAREL QSLLRQRGIDATSYVAMRYWHPFTESAVADIKADGIDQVVVLPLYPHFSISTSGSSFRELQRLRQTDESFRKLPIRCIRS WYDHPGYVRAMAELIAEQVRLSDVPEEAQVFFSAHGVPKSYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQS RVGPEEWIQPYTDQVIEQLGEAGTRDLVVVPISFVSEHIETLAELDIEYRELATEAGIVHFRRVPALDTYPTFIEGLADL VGSSLEGPEINLDEAAKLAGRVKFYPQERWQWGLNTSSEAWNGRIAMLGFAAFLLELISGHGPLHAIGLL
Specific function: Catalyzes the ferrous insertion into protoporphyrin IX [H]
COG id: COG0276
COG function: function code H; Protoheme ferro-lyase (ferrochelatase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ferrochelatase family [H]
Homologues:
Organism=Homo sapiens, GI60499025, Length=337, Percent_Identity=37.0919881305638, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI60499021, Length=337, Percent_Identity=37.0919881305638, Blast_Score=206, Evalue=3e-53, Organism=Escherichia coli, GI1786681, Length=328, Percent_Identity=32.3170731707317, Blast_Score=135, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6324750, Length=339, Percent_Identity=35.693215339233, Blast_Score=202, Evalue=6e-53, Organism=Drosophila melanogaster, GI17864156, Length=332, Percent_Identity=34.6385542168675, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24651774, Length=261, Percent_Identity=32.183908045977, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI45552018, Length=173, Percent_Identity=38.728323699422, Blast_Score=121, Evalue=9e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001015 - InterPro: IPR019772 [H]
Pfam domain/function: PF00762 Ferrochelatase [H]
EC number: =4.99.1.1 [H]
Molecular weight: Translated: 43789; Mature: 43658
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00534 FERROCHELATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARVGVLLMNLGGPERIQDVGPFLFNIFADPEIIRLPNPALQRPLAWLISTLRSSKSEQA CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHH YRSIGGGSPLRRITEQQARELQSLLRQRGIDATSYVAMRYWHPFTESAVADIKADGIDQV HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCE VVLPLYPHFSISTSGSSFRELQRLRQTDESFRKLPIRCIRSWYDHPGYVRAMAELIAEQV EEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RLSDVPEEAQVFFSAHGVPKSYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQ HHCCCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH SRVGPEEWIQPYTDQVIEQLGEAGTRDLVVVPISFVSEHIETLAELDIEYRELATEAGIV HCCCHHHHHCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHH HFRRVPALDTYPTFIEGLADLVGSSLEGPEINLDEAAKLAGRVKFYPQERWQWGLNTSSE HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCC AWNGRIAMLGFAAFLLELISGHGPLHAIGLL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ARVGVLLMNLGGPERIQDVGPFLFNIFADPEIIRLPNPALQRPLAWLISTLRSSKSEQA CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHH YRSIGGGSPLRRITEQQARELQSLLRQRGIDATSYVAMRYWHPFTESAVADIKADGIDQV HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCE VVLPLYPHFSISTSGSSFRELQRLRQTDESFRKLPIRCIRSWYDHPGYVRAMAELIAEQV EEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RLSDVPEEAQVFFSAHGVPKSYVEQAGDPYQKEIEACTTLIMAELENLLGYGNPHSLAYQ HHCCCCHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH SRVGPEEWIQPYTDQVIEQLGEAGTRDLVVVPISFVSEHIETLAELDIEYRELATEAGIV HCCCHHHHHCHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHH HFRRVPALDTYPTFIEGLADLVGSSLEGPEINLDEAAKLAGRVKFYPQERWQWGLNTSSE HHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCC AWNGRIAMLGFAAFLLELISGHGPLHAIGLL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA