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The map label for this gene is csoS1 [H]

Identifier: 33863476

GI number: 33863476

Start: 1294868

End: 1295179

Strand: Reverse

Name: csoS1 [H]

Synonym: PMT1206

Alternate gene names: 33863476

Gene position: 1295179-1294868 (Counterclockwise)

Preceding gene: 33863478

Following gene: 33863475

Centisome position: 53.72

GC content: 58.65

Gene sequence:

>312_bases
ATGGCTAGCGAAACCATGGGCATCGCCCTAGGCATGATCGAAACCCGCGGCCTCGTGCCAGCAATTGAAGCTGCTGACGC
CATGACCAAGGCAGCTGAAGTGCGCCTGATTGGTCGTGAGTTTGTCGGTGGTGGATATGTCACCGTGCTCGTGCGTGGTG
AGACAGGTGCTGTGAACGCCGCCGTTCGTGCTGGCGCTGATGCTTGTGAGCGTGTTGGTGACGGCCTTGTGGCAGCGCAC
ATCATTGCTCGCCCTCATCGGGAAGTTGAGCCTGCGCTAGGCAACGGCAATTTCTTAGGTCAGAAGGACTGA

Upstream 100 bases:

>100_bases
ATGGATGGTGATCTCCGTTTCGGCTGAATTTGCTTGACGGAAGTTGCCTGCGCAGAGCATTCTCCTTCCCGAACATTCAA
TCTCCTACTACAGGTAAGCA

Downstream 100 bases:

>100_bases
GGCCTTCTGCGATGGCTCTAAGAGCTTCGCCATCTCAACCTTCTATACCGACTTAAAAGGAGCTATTCCATGAGCAAGAA
GTATGACGCAGGGGTTAAGG

Product: carboxysome shell protein CsoS1

Products: NA

Alternate protein names: Carboxysome shell protein CsoS1 [H]

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MASETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPALGNGNFLGQKD

Sequences:

>Translated_103_residues
MASETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAH
IIARPHREVEPALGNGNFLGQKD
>Mature_102_residues
ASETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNAAVRAGADACERVGDGLVAAHI
IARPHREVEPALGNGNFLGQKD

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=82, Percent_Identity=57.3170731707317, Blast_Score=79, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 10557; Mature: 10426

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNA
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHEEECHHCCCCCEEEEEEECCCCCCHH
AVRAGADACERVGDGLVAAHIIARPHREVEPALGNGNFLGQKD
HHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASETMGIALGMIETRGLVPAIEAADAMTKAAEVRLIGREFVGGGYVTVLVRGETGAVNA
CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHEEECHHCCCCCEEEEEEECCCCCCHH
AVRAGADACERVGDGLVAAHIIARPHREVEPALGNGNFLGQKD
HHHCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12917486 [H]