| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863418
Identifier: 33863418
GI number: 33863418
Start: 1236255
End: 1237814
Strand: Reverse
Name: 33863418
Synonym: PMT1147
Alternate gene names: NA
Gene position: 1237814-1236255 (Counterclockwise)
Preceding gene: 33863421
Following gene: 33863401
Centisome position: 51.34
GC content: 55.19
Gene sequence:
>1560_bases GTGATTGGGCTATTCGGCGCTTTGCTGTTCGGACTTGCTGGAGTATCGCCGCTGAGAGCTGCGGAGCGATTGGAGGTGCA GCTTGAGGGGATGGTGATACCGGTTTGGATTAGGGAGTTGGTCGATTTGGGGCGGCCTGGGGGCAGCAGTAGTTCTGAAC TCATCACCTGGCTCAATTTGCTCGATGCCGATAGCCGCTTCGATCTCTTTGAGCTGCTTCAGGCACCTTTGCTTACAGAT CAGAGCATGGCTCGACAGATGCTGCGTAGTTGGGCAGGACGTCAGCTGCTTGATGCCGTTAGTGATTTGGTGAGGGTCGA TGACGACAGTAGTGGCATTGTCTTGTTCAACACTCTGGAACTGCTCTTGAACAGTCAGTCAGAGGTGACCGCTCAGGATT TGCTTGAGGATCTCCCTGCTGAAAATGTACGCCTCGATCTTGATGCTTTACTTCAGGTCGCAAGTCGCTGGCGGCGTCAG TTGCAACAGCAGCAGCAGTTGGTGTTAACGCTAGGGAGGTTTCCAGCCACACAAGTTCCAGTTTTGCAAGAGCTTGCAGG TAAGGAAGTTTTTGCCGCAGGACCTGAGTTCAAACCTTTGCCAGTGGCTCATCGCACCAAGCCCCTCCAGCTAGAGCTGT GGCGCCCACCTGATGGCACTCCGTTGCGGTCGAGCTGGGTGGTGCTCATGCCAGGCTTGGGTGGAAGCCAGGATCATTTT CGTTGGTTGGCTCTCAGCCTTCAACGTAAGGGCTGGCCGGTTGTGGTGCTTGAGCATCCAGGTAGTGATGCCAAAGCGGT GCATGCCCTGCTGAAGGGGCAACGACTTGCACCTGGAGCAGAGGTGTTGCCTGACCGCTTGGCGGATCTGCAGGCTGTCC TGCAGGCACGAGAGCAAGGCACGTTGGTATTGCCTGGTCAGAAGTTGGTGCTTATGGGTCACTCCCTTGGGGCACTGACG GCTCTATTGGCTGCTGATATGACCCCGGAGCCTGGTTTGTATACCCGCTGTCGTAAGGCTCTCGACGATCTTCCTCTCAC CAATCTCTCGCGCTTATTGCAATGTCAGTTGGTTGATGTGCAAATGCCAAAACTGCAGTCAATCCCCCAGCTAGAGGCAA TCGTGGCTCTCAACAGTTTTGGTAGCTTGCTGTGGCCTCGTCATGGGGCTGTGCCTTTGTCGGTTCCAGTGTTACTGACT GGCGGCACCCTTGATTTGATTACTCCTCCGCTGACTGAGCAGCTCGATTTGCTTTTGGCAATCTCACCCCATCCCGCTAG TCGAGTCGTGCTTGTGGAGGGCGCTAGCCATTTTTCACCGGTGCGGGTTGAAGGTCAGATGGGTGAGGGTCGTGGCGATG ATCTCTTTCAACTAGGCGAAGAGCTGGTAGGGCGTGAGCCGCTAGCTGTGCAGCGATTGTTAGCAGTGGAGATTCAAATC TTTTTGGAGCAGGTTGAGGCTGGCGAAGCCCTTCAGGGCGCCACACATCAGCAGGTCGGGGATTTGCGGCTTCATCGTTT GGATCGCAACGCAGCAAAGAGACTTCGCAAATCTCAGTAG
Upstream 100 bases:
>100_bases CACTGAACCGATCTAAGCCCTTCAATGCTTGAGTGAAAATGGTTTGACTCGTTAGCGGTATTCGGCGTTGGCATTAACAC GCCCAATTGGACAGCGAATT
Downstream 100 bases:
>100_bases CGGACGCGGGGATCAATCAGAGCAACGAGCAGATCCACGCTCACGCTTACCAGCACCATCAGGGCAGCCACGACAACCAC AATTCCTTGAACCACTGGGT
Product: dienelactone hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MIGLFGALLFGLAGVSPLRAAERLEVQLEGMVIPVWIRELVDLGRPGGSSSSELITWLNLLDADSRFDLFELLQAPLLTD QSMARQMLRSWAGRQLLDAVSDLVRVDDDSSGIVLFNTLELLLNSQSEVTAQDLLEDLPAENVRLDLDALLQVASRWRRQ LQQQQQLVLTLGRFPATQVPVLQELAGKEVFAAGPEFKPLPVAHRTKPLQLELWRPPDGTPLRSSWVVLMPGLGGSQDHF RWLALSLQRKGWPVVVLEHPGSDAKAVHALLKGQRLAPGAEVLPDRLADLQAVLQAREQGTLVLPGQKLVLMGHSLGALT ALLAADMTPEPGLYTRCRKALDDLPLTNLSRLLQCQLVDVQMPKLQSIPQLEAIVALNSFGSLLWPRHGAVPLSVPVLLT GGTLDLITPPLTEQLDLLLAISPHPASRVVLVEGASHFSPVRVEGQMGEGRGDDLFQLGEELVGREPLAVQRLLAVEIQI FLEQVEAGEALQGATHQQVGDLRLHRLDRNAAKRLRKSQ
Sequences:
>Translated_519_residues MIGLFGALLFGLAGVSPLRAAERLEVQLEGMVIPVWIRELVDLGRPGGSSSSELITWLNLLDADSRFDLFELLQAPLLTD QSMARQMLRSWAGRQLLDAVSDLVRVDDDSSGIVLFNTLELLLNSQSEVTAQDLLEDLPAENVRLDLDALLQVASRWRRQ LQQQQQLVLTLGRFPATQVPVLQELAGKEVFAAGPEFKPLPVAHRTKPLQLELWRPPDGTPLRSSWVVLMPGLGGSQDHF RWLALSLQRKGWPVVVLEHPGSDAKAVHALLKGQRLAPGAEVLPDRLADLQAVLQAREQGTLVLPGQKLVLMGHSLGALT ALLAADMTPEPGLYTRCRKALDDLPLTNLSRLLQCQLVDVQMPKLQSIPQLEAIVALNSFGSLLWPRHGAVPLSVPVLLT GGTLDLITPPLTEQLDLLLAISPHPASRVVLVEGASHFSPVRVEGQMGEGRGDDLFQLGEELVGREPLAVQRLLAVEIQI FLEQVEAGEALQGATHQQVGDLRLHRLDRNAAKRLRKSQ >Mature_519_residues MIGLFGALLFGLAGVSPLRAAERLEVQLEGMVIPVWIRELVDLGRPGGSSSSELITWLNLLDADSRFDLFELLQAPLLTD QSMARQMLRSWAGRQLLDAVSDLVRVDDDSSGIVLFNTLELLLNSQSEVTAQDLLEDLPAENVRLDLDALLQVASRWRRQ LQQQQQLVLTLGRFPATQVPVLQELAGKEVFAAGPEFKPLPVAHRTKPLQLELWRPPDGTPLRSSWVVLMPGLGGSQDHF RWLALSLQRKGWPVVVLEHPGSDAKAVHALLKGQRLAPGAEVLPDRLADLQAVLQAREQGTLVLPGQKLVLMGHSLGALT ALLAADMTPEPGLYTRCRKALDDLPLTNLSRLLQCQLVDVQMPKLQSIPQLEAIVALNSFGSLLWPRHGAVPLSVPVLLT GGTLDLITPPLTEQLDLLLAISPHPASRVVLVEGASHFSPVRVEGQMGEGRGDDLFQLGEELVGREPLAVQRLLAVEIQI FLEQVEAGEALQGATHQQVGDLRLHRLDRNAAKRLRKSQ
Specific function: Unknown
COG id: COG4188
COG function: function code R; Predicted dienelactone hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56834; Mature: 56834
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLFGALLFGLAGVSPLRAAERLEVQLEGMVIPVWIRELVDLGRPGGSSSSELITWLNL CCHHHHHHHHHHCCCCHHHHHHHHEEEECCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHH LDADSRFDLFELLQAPLLTDQSMARQMLRSWAGRQLLDAVSDLVRVDDDSSGIVLFNTLE HCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHH LLLNSQSEVTAQDLLEDLPAENVRLDLDALLQVASRWRRQLQQQQQLVLTLGRFPATQVP HHHCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH VLQELAGKEVFAAGPEFKPLPVAHRTKPLQLELWRPPDGTPLRSSWVVLMPGLGGSQDHF HHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHH RWLALSLQRKGWPVVVLEHPGSDAKAVHALLKGQRLAPGAEVLPDRLADLQAVLQAREQG HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TLVLPGQKLVLMGHSLGALTALLAADMTPEPGLYTRCRKALDDLPLTNLSRLLQCQLVDV CEEECCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC QMPKLQSIPQLEAIVALNSFGSLLWPRHGAVPLSVPVLLTGGTLDLITPPLTEQLDLLLA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCHHCCCEEEE ISPHPASRVVLVEGASHFSPVRVEGQMGEGRGDDLFQLGEELVGREPLAVQRLLAVEIQI ECCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH FLEQVEAGEALQGATHQQVGDLRLHRLDRNAAKRLRKSQ HHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIGLFGALLFGLAGVSPLRAAERLEVQLEGMVIPVWIRELVDLGRPGGSSSSELITWLNL CCHHHHHHHHHHCCCCHHHHHHHHEEEECCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHH LDADSRFDLFELLQAPLLTDQSMARQMLRSWAGRQLLDAVSDLVRVDDDSSGIVLFNTLE HCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHH LLLNSQSEVTAQDLLEDLPAENVRLDLDALLQVASRWRRQLQQQQQLVLTLGRFPATQVP HHHCCCCCHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH VLQELAGKEVFAAGPEFKPLPVAHRTKPLQLELWRPPDGTPLRSSWVVLMPGLGGSQDHF HHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCHHHH RWLALSLQRKGWPVVVLEHPGSDAKAVHALLKGQRLAPGAEVLPDRLADLQAVLQAREQG HHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC TLVLPGQKLVLMGHSLGALTALLAADMTPEPGLYTRCRKALDDLPLTNLSRLLQCQLVDV CEEECCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCC QMPKLQSIPQLEAIVALNSFGSLLWPRHGAVPLSVPVLLTGGTLDLITPPLTEQLDLLLA CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCHHCCCEEEE ISPHPASRVVLVEGASHFSPVRVEGQMGEGRGDDLFQLGEELVGREPLAVQRLLAVEIQI ECCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH FLEQVEAGEALQGATHQQVGDLRLHRLDRNAAKRLRKSQ HHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA