| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is folD [H]
Identifier: 33863381
GI number: 33863381
Start: 1202106
End: 1203014
Strand: Reverse
Name: folD [H]
Synonym: PMT1110
Alternate gene names: 33863381
Gene position: 1203014-1202106 (Counterclockwise)
Preceding gene: 33863383
Following gene: 33863380
Centisome position: 49.9
GC content: 56.0
Gene sequence:
>909_bases ATGGCCCTTAGGCTTGATGGCAAACAACTGGCCGCAGAATTGGAGCAGCGTCTCCAAGCTGAAATTGCGGCTGGCTTGGT GCAAGCCGGAAGGCCGCCAGGGTTAGCTGTGTTGCGTATTGGGGACGACCCCGCCAGTGGGGTGTATGTGGCCAACAAGC AGAAAGCTTGTGGGCGTATTGGCGTGGCCAGCCATCTAACCCATTTGCCGGAAACGGTTTCAGTTTCAAAGGTTTTGGCC ACGATCCAGGCCTTAAACATCGATGAGCGAGTGGACGGCATTCTTTTGCAATTGCCTCTACCCAAGGGCCTTGATGAAGG GCCTTTGCTGGCTGCCATTGATCCCGAGAAGGATGCCGATGGTCTGCATACCCTCAACCTTGGCCGATTGTTGAAAGGTG AACCTGGGCCTCGTAGTTGTACCCCTGCCGGTGTGATGGCCTTGTTGGCACGCCATCAGATTTCTCTGGAGCGGAAAAGG GCTGTTGTGATTGGGCGCAGCATCCTGGTAGGCCAACCAATGGCATTGATGCTTCAGGCGGCCAATGCCACTGTGAGCGT GGCCCATTCTCATACCGGTGATCTGGCCTCGTTAACTCAGCAGGCCGATGTGTTGGTGGTGGCGGCAGGGCGAGCGCGGA TGATTGGCGCAGAGCATGTCAAACCCGGAGCAGTGGTTGTCGATGTTGGCATTCATCGCCTTCCCCTAGATCCTGAACTA GGGACGCAAGCCAAGGCCAGGTTGTGTGGAGATGTACGAACGCAAGAAGTTGAACCTTTAGCAAGTGCATTGACCCCTGT CCCTGGTGGTGTAGGTCCGATGACCGTGACCATGCTCTTGGTGAATACCGTGGCTAGATGGCAGCAGCATTGCGGTTTGC CCTTCGGCCTGAGAGATTTGCTGGTTTGA
Upstream 100 bases:
>100_bases GAGCCTGTTTAAGGTTGGAAGACGGACCACAGAAGCTGGCACTTGTCCTAAACGCTAGCTCTCTTCTGCGTGCATGCTTG GGGAAGCATCGGATCGGTGA
Downstream 100 bases:
>100_bases GACTGGTTGGCCTGAGAGAATCCCATGAACGAGACAAGGTTCATGGCGGCGGCGGTCAGCACCTTCTTCGACTTCCCTGC TTATTTGGCTGCGGCCAAAG
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MALRLDGKQLAAELEQRLQAEIAAGLVQAGRPPGLAVLRIGDDPASGVYVANKQKACGRIGVASHLTHLPETVSVSKVLA TIQALNIDERVDGILLQLPLPKGLDEGPLLAAIDPEKDADGLHTLNLGRLLKGEPGPRSCTPAGVMALLARHQISLERKR AVVIGRSILVGQPMALMLQAANATVSVAHSHTGDLASLTQQADVLVVAAGRARMIGAEHVKPGAVVVDVGIHRLPLDPEL GTQAKARLCGDVRTQEVEPLASALTPVPGGVGPMTVTMLLVNTVARWQQHCGLPFGLRDLLV
Sequences:
>Translated_302_residues MALRLDGKQLAAELEQRLQAEIAAGLVQAGRPPGLAVLRIGDDPASGVYVANKQKACGRIGVASHLTHLPETVSVSKVLA TIQALNIDERVDGILLQLPLPKGLDEGPLLAAIDPEKDADGLHTLNLGRLLKGEPGPRSCTPAGVMALLARHQISLERKR AVVIGRSILVGQPMALMLQAANATVSVAHSHTGDLASLTQQADVLVVAAGRARMIGAEHVKPGAVVVDVGIHRLPLDPEL GTQAKARLCGDVRTQEVEPLASALTPVPGGVGPMTVTMLLVNTVARWQQHCGLPFGLRDLLV >Mature_301_residues ALRLDGKQLAAELEQRLQAEIAAGLVQAGRPPGLAVLRIGDDPASGVYVANKQKACGRIGVASHLTHLPETVSVSKVLAT IQALNIDERVDGILLQLPLPKGLDEGPLLAAIDPEKDADGLHTLNLGRLLKGEPGPRSCTPAGVMALLARHQISLERKRA VVIGRSILVGQPMALMLQAANATVSVAHSHTGDLASLTQQADVLVVAAGRARMIGAEHVKPGAVVVDVGIHRLPLDPELG TQAKARLCGDVRTQEVEPLASALTPVPGGVGPMTVTMLLVNTVARWQQHCGLPFGLRDLLV
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222418558, Length=293, Percent_Identity=40.2730375426621, Blast_Score=196, Evalue=1e-50, Organism=Homo sapiens, GI222136639, Length=285, Percent_Identity=39.6491228070175, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI94721354, Length=293, Percent_Identity=38.9078498293515, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI36796743, Length=210, Percent_Identity=27.1428571428571, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1786741, Length=284, Percent_Identity=45.4225352112676, Blast_Score=233, Evalue=1e-62, Organism=Caenorhabditis elegans, GI17568735, Length=261, Percent_Identity=39.463601532567, Blast_Score=170, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6319558, Length=283, Percent_Identity=40.6360424028269, Blast_Score=203, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6321643, Length=293, Percent_Identity=38.9078498293515, Blast_Score=196, Evalue=5e-51, Organism=Drosophila melanogaster, GI62472483, Length=284, Percent_Identity=42.6056338028169, Blast_Score=203, Evalue=1e-52, Organism=Drosophila melanogaster, GI45551871, Length=284, Percent_Identity=42.6056338028169, Blast_Score=203, Evalue=1e-52, Organism=Drosophila melanogaster, GI24645718, Length=284, Percent_Identity=42.6056338028169, Blast_Score=203, Evalue=1e-52, Organism=Drosophila melanogaster, GI17137370, Length=284, Percent_Identity=42.6056338028169, Blast_Score=203, Evalue=1e-52, Organism=Drosophila melanogaster, GI17136816, Length=301, Percent_Identity=42.1926910299003, Blast_Score=201, Evalue=3e-52, Organism=Drosophila melanogaster, GI17136818, Length=301, Percent_Identity=42.1926910299003, Blast_Score=201, Evalue=4e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 31606; Mature: 31475
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALRLDGKQLAAELEQRLQAEIAAGLVQAGRPPGLAVLRIGDDPASGVYVANKQKACGRI CEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCCCCC GVASHLTHLPETVSVSKVLATIQALNIDERVDGILLQLPLPKGLDEGPLLAAIDPEKDAD CHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCC GLHTLNLGRLLKGEPGPRSCTPAGVMALLARHQISLERKRAVVIGRSILVGQPMALMLQA CCEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECHHHHCCCHHHHEEC ANATVSVAHSHTGDLASLTQQADVLVVAAGRARMIGAEHVKPGAVVVDVGIHRLPLDPEL CCCEEEEEECCCCCHHHHHCCCCEEEEECCCEEECCCCCCCCCEEEEECCCEECCCCCCC GTQAKARLCGDVRTQEVEPLASALTPVPGGVGPMTVTMLLVNTVARWQQHCGLPFGLRDL CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH LV CC >Mature Secondary Structure ALRLDGKQLAAELEQRLQAEIAAGLVQAGRPPGLAVLRIGDDPASGVYVANKQKACGRI EEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEECCCCCCCCC GVASHLTHLPETVSVSKVLATIQALNIDERVDGILLQLPLPKGLDEGPLLAAIDPEKDAD CHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCEEEEECCCCCCCCCCEEEEECCCCCCC GLHTLNLGRLLKGEPGPRSCTPAGVMALLARHQISLERKRAVVIGRSILVGQPMALMLQA CCEEECHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECHHHHCCCHHHHEEC ANATVSVAHSHTGDLASLTQQADVLVVAAGRARMIGAEHVKPGAVVVDVGIHRLPLDPEL CCCEEEEEECCCCCHHHHHCCCCEEEEECCCEEECCCCCCCCCEEEEECCCEECCCCCCC GTQAKARLCGDVRTQEVEPLASALTPVPGGVGPMTVTMLLVNTVARWQQHCGLPFGLRDL CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH LV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA