| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863359
Identifier: 33863359
GI number: 33863359
Start: 1178931
End: 1179557
Strand: Reverse
Name: 33863359
Synonym: PMT1088
Alternate gene names: NA
Gene position: 1179557-1178931 (Counterclockwise)
Preceding gene: 33863360
Following gene: 33863358
Centisome position: 48.93
GC content: 53.59
Gene sequence:
>627_bases ATGCAAGGTTTTTGCTATTCAGTCTGCGCAGACTTGTGTGAACAGATCCATGTCATGGCTTCGATGTCAAATTCTTCAAA GCAAAGCCCAGCAGAGTCTCTGGGTATGGCTTTTTCTGGTTGGGGCCTGAGTTGGGGAGGCTGGCTGGATAATCGCCAGG GTGAGTGGTGGCTGTTGGCACAGATCATCCTGATTGCAGCCCATCTCTTGCCCCCCTGGCCTGCTTTAGAGCGTTGGGGA TATCGTTGGCCATTGCCAATTACCATTTTTGGCGCCTGCCTGTTTTGTGTGGGGGTGTTGTTAGTGGTTCAAGCGTTTTG GCGTCTTGGCGCAAGCCTTTCACCATTGCCTGATCCAAAGCCCGCTGCTGCCCTTGTAACGATGGGTGCCTATCGACGCT GCCGCCATCCGCTTTATCAAGCGCTGTTGCTGTGTTCCGCTGGAGTTGCCATTGCCCTTGGCAGCCTGTTGCATGTGGCG TTGTTCCTTGCTCTGTGCCTTTTGCTGAGGGGTAAGGCTCGGCGGGAGGAGCGAAAGTTAATGATCTTGCATCCTGAATA CAGTGCCTATCGCGCTAGTACTGCAGCGATTATTCCAGGGTTTCCTCTGCTGGACTGGAGAAGCTGA
Upstream 100 bases:
>100_bases CAGCGCTGGTTTTGAGCAGGCATACACAAGCCTTTATGGCCCTTTGTTTGAGGCATTGGCGATCTAGAAGTCATTGCGGC TGATCATTGATTTGAAGGTC
Downstream 100 bases:
>100_bases TTGAATTTTAAGCTGTGCTAATCAATTGTTATTCCAGTAACATAATTGTTGTTCAGGACCAGTACTTTTCAATATCCTCT GATTACAAGATAGTGAGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: S-Isoprenylcysteine Methyltransferase-Like Protein; Isoprenylcysteine Carboxyl Methyltransferase
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MQGFCYSVCADLCEQIHVMASMSNSSKQSPAESLGMAFSGWGLSWGGWLDNRQGEWWLLAQIILIAAHLLPPWPALERWG YRWPLPITIFGACLFCVGVLLVVQAFWRLGASLSPLPDPKPAAALVTMGAYRRCRHPLYQALLLCSAGVAIALGSLLHVA LFLALCLLLRGKARREERKLMILHPEYSAYRASTAAIIPGFPLLDWRS
Sequences:
>Translated_208_residues MQGFCYSVCADLCEQIHVMASMSNSSKQSPAESLGMAFSGWGLSWGGWLDNRQGEWWLLAQIILIAAHLLPPWPALERWG YRWPLPITIFGACLFCVGVLLVVQAFWRLGASLSPLPDPKPAAALVTMGAYRRCRHPLYQALLLCSAGVAIALGSLLHVA LFLALCLLLRGKARREERKLMILHPEYSAYRASTAAIIPGFPLLDWRS >Mature_208_residues MQGFCYSVCADLCEQIHVMASMSNSSKQSPAESLGMAFSGWGLSWGGWLDNRQGEWWLLAQIILIAAHLLPPWPALERWG YRWPLPITIFGACLFCVGVLLVVQAFWRLGASLSPLPDPKPAAALVTMGAYRRCRHPLYQALLLCSAGVAIALGSLLHVA LFLALCLLLRGKARREERKLMILHPEYSAYRASTAAIIPGFPLLDWRS
Specific function: Unknown
COG id: COG2020
COG function: function code O; Putative protein-S-isoprenylcysteine methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23022; Mature: 23022
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGFCYSVCADLCEQIHVMASMSNSSKQSPAESLGMAFSGWGLSWGGWLDNRQGEWWLLA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH QIILIAAHLLPPWPALERWGYRWPLPITIFGACLFCVGVLLVVQAFWRLGASLSPLPDPK HHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PAAALVTMGAYRRCRHPLYQALLLCSAGVAIALGSLLHVALFLALCLLLRGKARREERKL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE MILHPEYSAYRASTAAIIPGFPLLDWRS EEECCCHHHHHHCCHHHCCCCCCCCCCC >Mature Secondary Structure MQGFCYSVCADLCEQIHVMASMSNSSKQSPAESLGMAFSGWGLSWGGWLDNRQGEWWLLA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH QIILIAAHLLPPWPALERWGYRWPLPITIFGACLFCVGVLLVVQAFWRLGASLSPLPDPK HHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PAAALVTMGAYRRCRHPLYQALLLCSAGVAIALGSLLHVALFLALCLLLRGKARREERKL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE MILHPEYSAYRASTAAIIPGFPLLDWRS EEECCCHHHHHHCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA