| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863287
Identifier: 33863287
GI number: 33863287
Start: 1091718
End: 1092365
Strand: Reverse
Name: 33863287
Synonym: PMT1016
Alternate gene names: NA
Gene position: 1092365-1091718 (Counterclockwise)
Preceding gene: 33863288
Following gene: 33863286
Centisome position: 45.31
GC content: 51.54
Gene sequence:
>648_bases TTGGCGGTTCAAGTTCTTCGAAACGATCAGCGTTCCAAGCTCGATCAGAACGATGACGTGCTTTTTTATGCTGAGCCTCG TTTCGTTCATCATCTGGACGAGGCATTTCGGGGGCGTTTGACGCAGCTTTATCGCGAGAAGATTCCGCCTTGCTCCACAG TGCTCGACTTGATGTCGAGCTGGGTGTCTCACCTGCCTGATGATGTCATCTATGACCGTGTGATCGGCCATGGCCTCAAT GAAAAGGAACTCGTGGCCAACAACCGGCTTGATAGCCATTGGGTTCAGAATTTCAATCTCAACCAGTCCATTCCGCTTAA GGATGAGAGCATTGATGCGACTCTCATCATTGCGGGTTGGCAATATCTTCAGCAGCCTGAGGATATGGCTGAGGAGTTAT TGCGTGTAACGCGCTCGAAGGGCCAAGTGATCGTTGCGTTCTCGAATCGGATGTTTTTCACAAAAGCTCCGCAGATCTGG AGGGATGGCGATGACCGTGATCATCTCACCTACGTTTCTAAGGTGCTGATGGCTCAGGGTTGGCCAAAGCCTGAGATCAT CGCAGAGGAGACTCGCTCAACAGGTGTCTTGGGGTTGCTAGGCGGCAAAGGAGACCCATTTTTTGCGGTCATCGCGACAA AGCCTTGA
Upstream 100 bases:
>100_bases TTTGCGGATATCAGCTTAGTTGAATCCTGTGAGGCCTTCAGGTTATTGACTCGCGGAATGGTTTGTAGCAGGCGAAACTG AGCATCGCTTCGCAATCCCC
Downstream 100 bases:
>100_bases CTGCATTAAAGCCAACAAGGGAAGTAATTTGAGTTTGCAAACAAGAGGAAACTCTTTGCATTAAGGTTATAATTAATCCA GGCTCTATGCACACATTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MAVQVLRNDQRSKLDQNDDVLFYAEPRFVHHLDEAFRGRLTQLYREKIPPCSTVLDLMSSWVSHLPDDVIYDRVIGHGLN EKELVANNRLDSHWVQNFNLNQSIPLKDESIDATLIIAGWQYLQQPEDMAEELLRVTRSKGQVIVAFSNRMFFTKAPQIW RDGDDRDHLTYVSKVLMAQGWPKPEIIAEETRSTGVLGLLGGKGDPFFAVIATKP
Sequences:
>Translated_215_residues MAVQVLRNDQRSKLDQNDDVLFYAEPRFVHHLDEAFRGRLTQLYREKIPPCSTVLDLMSSWVSHLPDDVIYDRVIGHGLN EKELVANNRLDSHWVQNFNLNQSIPLKDESIDATLIIAGWQYLQQPEDMAEELLRVTRSKGQVIVAFSNRMFFTKAPQIW RDGDDRDHLTYVSKVLMAQGWPKPEIIAEETRSTGVLGLLGGKGDPFFAVIATKP >Mature_214_residues AVQVLRNDQRSKLDQNDDVLFYAEPRFVHHLDEAFRGRLTQLYREKIPPCSTVLDLMSSWVSHLPDDVIYDRVIGHGLNE KELVANNRLDSHWVQNFNLNQSIPLKDESIDATLIIAGWQYLQQPEDMAEELLRVTRSKGQVIVAFSNRMFFTKAPQIWR DGDDRDHLTYVSKVLMAQGWPKPEIIAEETRSTGVLGLLGGKGDPFFAVIATKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24603; Mature: 24472
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQVLRNDQRSKLDQNDDVLFYAEPRFVHHLDEAFRGRLTQLYREKIPPCSTVLDLMSS CEEHEECCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH WVSHLPDDVIYDRVIGHGLNEKELVANNRLDSHWVQNFNLNQSIPLKDESIDATLIIAGW HHHHCCHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECH QYLQQPEDMAEELLRVTRSKGQVIVAFSNRMFFTKAPQIWRDGDDRDHLTYVSKVLMAQG HHHCCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCHHHCCCCCCHHHHHHHHHHHHCC WPKPEIIAEETRSTGVLGLLGGKGDPFFAVIATKP CCCCCHHHHHCCCCCEEEEECCCCCCEEEEEEECC >Mature Secondary Structure AVQVLRNDQRSKLDQNDDVLFYAEPRFVHHLDEAFRGRLTQLYREKIPPCSTVLDLMSS EEHEECCCHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH WVSHLPDDVIYDRVIGHGLNEKELVANNRLDSHWVQNFNLNQSIPLKDESIDATLIIAGW HHHHCCHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEECH QYLQQPEDMAEELLRVTRSKGQVIVAFSNRMFFTKAPQIWRDGDDRDHLTYVSKVLMAQG HHHCCHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCHHHCCCCCCHHHHHHHHHHHHCC WPKPEIIAEETRSTGVLGLLGGKGDPFFAVIATKP CCCCCHHHHHCCCCCEEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA