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The map label for this gene is 33863277

Identifier: 33863277

GI number: 33863277

Start: 1083552

End: 1083836

Strand: Reverse

Name: 33863277

Synonym: PMT1006

Alternate gene names: NA

Gene position: 1083836-1083552 (Counterclockwise)

Preceding gene: 33863280

Following gene: 33863276

Centisome position: 44.96

GC content: 46.32

Gene sequence:

>285_bases
ATGACAATGACAAAAAAACAACGCCAATGTGGGGGCTTTGGGACCTGCGTTGGTACGGATAGCCGAGGCTTTATTGCTAC
TTATCTAAGCCCAAAGCATCGATTATCGAAGTGGTTTCAAGCGCTCTCAGGCGGTCTTGCTGTCATCGTTAATACAACAG
AGTTTAATCACTCGCCTGATCATCCAGGTGATTGTCAATTGCTTCTTTCATCAATCAGACAGCCTCCTGCACCAATTGGA
TGTCCATCTCTTTTCCGTGCTACAAGCGAGGGGCTTTTGTTCTGA

Upstream 100 bases:

>100_bases
TGCATCCCAAGTGGACCAAACAATCCAGAGTGATGTGAAGAGGATGAAGGAGAGGGTGAGCTTTGATTGAGGCATTGAAT
GTGCCTGCCAAAAACGTTCC

Downstream 100 bases:

>100_bases
CCGATTGAAACTCGCGATTCAATGAACCAGCAGCAGGCTCTTTTTTTGAGACTGTTGTCTTGCTTGACGCAAGCCAGGCT
GAACTGGCGCAAGATGGTTG

Product: cystine-knot domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MTMTKKQRQCGGFGTCVGTDSRGFIATYLSPKHRLSKWFQALSGGLAVIVNTTEFNHSPDHPGDCQLLLSSIRQPPAPIG
CPSLFRATSEGLLF

Sequences:

>Translated_94_residues
MTMTKKQRQCGGFGTCVGTDSRGFIATYLSPKHRLSKWFQALSGGLAVIVNTTEFNHSPDHPGDCQLLLSSIRQPPAPIG
CPSLFRATSEGLLF
>Mature_93_residues
TMTKKQRQCGGFGTCVGTDSRGFIATYLSPKHRLSKWFQALSGGLAVIVNTTEFNHSPDHPGDCQLLLSSIRQPPAPIGC
PSLFRATSEGLLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10183; Mature: 10052

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTKKQRQCGGFGTCVGTDSRGFIATYLSPKHRLSKWFQALSGGLAVIVNTTEFNHSPD
CCCCCCCHHCCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC
HPGDCQLLLSSIRQPPAPIGCPSLFRATSEGLLF
CCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
TMTKKQRQCGGFGTCVGTDSRGFIATYLSPKHRLSKWFQALSGGLAVIVNTTEFNHSPD
CCCCCCHHCCCCCCEECCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCC
HPGDCQLLLSSIRQPPAPIGCPSLFRATSEGLLF
CCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA