| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863256
Identifier: 33863256
GI number: 33863256
Start: 1064578
End: 1065114
Strand: Reverse
Name: 33863256
Synonym: PMT0985
Alternate gene names: NA
Gene position: 1065114-1064578 (Counterclockwise)
Preceding gene: 33863257
Following gene: 33863254
Centisome position: 44.18
GC content: 51.77
Gene sequence:
>537_bases GTGGTCAGATCGTCATGGTGGCTGGGTGCTTTGCCTTGGTCATCGATGAGCAGTTCATCCTCAGCCTTGTTGCTGCCATG GGCAAATCGATTGTTTTGGCTACAACTGAGACAGAAATACCCCCAACTGATGCGCAGATTCCTGGTCGCGGCTGTGTTTT TGTTCACCACTCTTTCGCCAGCTGCATGGGCGGAAAAGCCATCGGTACTTCTGAACACGCTTCCCAAGGAGGTGAGAGGG AAGTTGGCTCCTCTATTTATGGCAAATGCGATTGGTCAAACTGGGCTCAATGGTCAGCTCAATGGCACAGCTGAAACACT CTTTCCAATTGTCAAAAGTGCTCTGACAAAGGCAGGTTATAGCGAGCAACCAATCCGAACCACGATTGGACCCTGGGGGT TTTCCGCGACCTGGGCACCACCCATTGGCGTGTCAGTTGATGGAACAGCAAGCCAAAAGACAGCAGTTTTGGTGACGCAA GCTACTGCCCTAGGGCCTGAAAGGGTGAACCTAAATGTTCGATTCGATGGCCTCTGA
Upstream 100 bases:
>100_bases ATGCCTAAGACCGGCGCATTGTCTCTTTTTTCTGGTCCGGGTTCTTAGCGCTGAATTCAAGCGGCCCTGCTTCCTAGTCA TCGCGACGGTTTTTCATGCA
Downstream 100 bases:
>100_bases AGAGTTGACCTGCTGGTGAATTCAGTCAGTCCATATCGCTAACCAGCTTATTTTTATCCAGTTGAAATGGAATAGTCACT GCATCTTGATACCAGTGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MVRSSWWLGALPWSSMSSSSSALLLPWANRLFWLQLRQKYPQLMRRFLVAAVFLFTTLSPAAWAEKPSVLLNTLPKEVRG KLAPLFMANAIGQTGLNGQLNGTAETLFPIVKSALTKAGYSEQPIRTTIGPWGFSATWAPPIGVSVDGTASQKTAVLVTQ ATALGPERVNLNVRFDGL
Sequences:
>Translated_178_residues MVRSSWWLGALPWSSMSSSSSALLLPWANRLFWLQLRQKYPQLMRRFLVAAVFLFTTLSPAAWAEKPSVLLNTLPKEVRG KLAPLFMANAIGQTGLNGQLNGTAETLFPIVKSALTKAGYSEQPIRTTIGPWGFSATWAPPIGVSVDGTASQKTAVLVTQ ATALGPERVNLNVRFDGL >Mature_178_residues MVRSSWWLGALPWSSMSSSSSALLLPWANRLFWLQLRQKYPQLMRRFLVAAVFLFTTLSPAAWAEKPSVLLNTLPKEVRG KLAPLFMANAIGQTGLNGQLNGTAETLFPIVKSALTKAGYSEQPIRTTIGPWGFSATWAPPIGVSVDGTASQKTAVLVTQ ATALGPERVNLNVRFDGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19358; Mature: 19358
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRSSWWLGALPWSSMSSSSSALLLPWANRLFWLQLRQKYPQLMRRFLVAAVFLFTTLSP CCCCCCEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AAWAEKPSVLLNTLPKEVRGKLAPLFMANAIGQTGLNGQLNGTAETLFPIVKSALTKAGY HHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC SEQPIRTTIGPWGFSATWAPPIGVSVDGTASQKTAVLVTQATALGPERVNLNVRFDGL CCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEHHHCCCEEEEEEEEECCC >Mature Secondary Structure MVRSSWWLGALPWSSMSSSSSALLLPWANRLFWLQLRQKYPQLMRRFLVAAVFLFTTLSP CCCCCCEECCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AAWAEKPSVLLNTLPKEVRGKLAPLFMANAIGQTGLNGQLNGTAETLFPIVKSALTKAGY HHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCC SEQPIRTTIGPWGFSATWAPPIGVSVDGTASQKTAVLVTQATALGPERVNLNVRFDGL CCCCCEECCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEEHHHCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA