| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862953
Identifier: 33862953
GI number: 33862953
Start: 737718
End: 738266
Strand: Direct
Name: 33862953
Synonym: PMT0681
Alternate gene names: NA
Gene position: 737718-738266 (Clockwise)
Preceding gene: 33862952
Following gene: 33862957
Centisome position: 30.6
GC content: 50.09
Gene sequence:
>549_bases ATGAAGGAGAATTTTTTGCAAAGCTCCATCTTCAAGGTAGTGCTCACTGCTGTTTTACTGGTTTTTAATCTGGTTTTCAG TGATCAAGCCTTAGCGGCAACCCTCAGTGTGGATCAGTTGAGTATCGATGCTTGTGATCAAAAGGATCCAGGTGCGCAGC CCAGTCTGACTAGGCCTATCGGCGCCAGTTGCTATGTGCTTTCAGGTGAGGTCACCAATCCAGGAAACTCTGCCGTGATT GATAGCGATGTTTTTGCTCAGATCTTGGATCCAAGTGGTGAACCTGTTTTGCCAAACCGCGCTCGGGTTGGTTCTATTGG CGACGTGCAACCCGGGTCAAGTATTTTTGCAGTGCGGTTGGCGATTCCGGCAGGAACTCCAGAGCCTTTACAAGTGAAGG GGGCAAAGGTAAAGGGATTCAAGGCTCCTGTTCGTACTCGTGCTGGAGACGATGATGAGCTGCTTCCGCTTGAACAGGCT GTAGACCCTGGTCTTTTATGGGGAACCAAGGCAGTGACCCCTTCGAAACAACCGCTAGATCAGCTGTAA
Upstream 100 bases:
>100_bases GTGAGCTAGGTTTTGATTTAGAAGATGTGGCTCAAGCCAATCTCGATAAGCTGGCTAGCAGGGCATCACGTGGCCAGATC TCAGGAAGTGGTGATCAACG
Downstream 100 bases:
>100_bases TAGCTCATTCCACTATTCAAGATCGCCACACTTGCAGTATTCAGCATTTGTTGCAGAAGACTCAGGGCTACTAACGCCAG GATCGCTGAGAGATCCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKENFLQSSIFKVVLTAVLLVFNLVFSDQALAATLSVDQLSIDACDQKDPGAQPSLTRPIGASCYVLSGEVTNPGNSAVI DSDVFAQILDPSGEPVLPNRARVGSIGDVQPGSSIFAVRLAIPAGTPEPLQVKGAKVKGFKAPVRTRAGDDDELLPLEQA VDPGLLWGTKAVTPSKQPLDQL
Sequences:
>Translated_182_residues MKENFLQSSIFKVVLTAVLLVFNLVFSDQALAATLSVDQLSIDACDQKDPGAQPSLTRPIGASCYVLSGEVTNPGNSAVI DSDVFAQILDPSGEPVLPNRARVGSIGDVQPGSSIFAVRLAIPAGTPEPLQVKGAKVKGFKAPVRTRAGDDDELLPLEQA VDPGLLWGTKAVTPSKQPLDQL >Mature_182_residues MKENFLQSSIFKVVLTAVLLVFNLVFSDQALAATLSVDQLSIDACDQKDPGAQPSLTRPIGASCYVLSGEVTNPGNSAVI DSDVFAQILDPSGEPVLPNRARVGSIGDVQPGSSIFAVRLAIPAGTPEPLQVKGAKVKGFKAPVRTRAGDDDELLPLEQA VDPGLLWGTKAVTPSKQPLDQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19104; Mature: 19104
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKENFLQSSIFKVVLTAVLLVFNLVFSDQALAATLSVDQLSIDACDQKDPGAQPSLTRPI CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCEEECCCCCCCCCCCCCCCCCC GASCYVLSGEVTNPGNSAVIDSDVFAQILDPSGEPVLPNRARVGSIGDVQPGSSIFAVRL CCEEEEEECCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE AIPAGTPEPLQVKGAKVKGFKAPVRTRAGDDDELLPLEQAVDPGLLWGTKAVTPSKQPLD EECCCCCCCEEECCCEECCCCCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCCCCCCCCC QL CC >Mature Secondary Structure MKENFLQSSIFKVVLTAVLLVFNLVFSDQALAATLSVDQLSIDACDQKDPGAQPSLTRPI CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCEEECCCCCCCCCCCCCCCCCC GASCYVLSGEVTNPGNSAVIDSDVFAQILDPSGEPVLPNRARVGSIGDVQPGSSIFAVRL CCEEEEEECCCCCCCCCEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE AIPAGTPEPLQVKGAKVKGFKAPVRTRAGDDDELLPLEQAVDPGLLWGTKAVTPSKQPLD EECCCCCCCEEECCCEECCCCCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCCCCCCCCC QL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA