| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862938
Identifier: 33862938
GI number: 33862938
Start: 722473
End: 723690
Strand: Direct
Name: 33862938
Synonym: PMT0666
Alternate gene names: NA
Gene position: 722473-723690 (Clockwise)
Preceding gene: 33862936
Following gene: 33862940
Centisome position: 29.97
GC content: 52.96
Gene sequence:
>1218_bases ATGGATCTCTGCTCTGTGCCTTGTCCAGCTTGGTTGGTCAACCGAATAGTTCAGGCTGGAGGGAGCATCAGCTTCCATCA ATACATGGACTGGGCCTTGCATGACCAAGTATATGGGGCCTATGCCTCAGGTCAGCTTCGTATTGGTCGTCAGGGTGATT TCGCGACTTCTCCTTCCTTAGGAGCTGACTTTGCCCAACTTTTGGCCATACAACTGGTTGATTGGTTCCAGCAACTTCAG CAGCGTGTTGACAAGGGAAAGTCTTTATCGTTGATAGAGGTGGGGCCTGGTGAAGGCGATTTAAGTGCTGATCTGATCTC AGCCCTGGAGGATCTGTGCCCAGCGCTGATACCAAGACTGGAGCTGGTTTTGGTGGAGAGCAATAAGGCCATGGCCTTAC GACAACGAGAGCGACTGAAATCTGTCACCAGTGTGCCGATTCACTGGCGAAGTCTTAATGAGTTGGCTCAAGCTCCCGCT ATCGGCGTGATGCTTGCTCATGAAATGTTGGATGCTCTGCCGGTGGAGCGGTTGGTGTGGCGCGATCAACGTCTATGGCG GCAGGGTGTTTGTCTTGAGAACGTCGATTCGGTTGCTCATCTTCGCTTCACTGAGCTTTTTCTTACAGACGCTTTGCATT CAGCTTTAACTGAGGCCCGAATGTGTTTGGGCATTCAGATCCCCCCTCCTGATGCTGCTGATGGTTGGTGCAGTGAATGG CATGGTGAACTGAAATCGTGGTTGAGTCAGGCAGCCTCTGCTCTGCTTTGCGGCCCCTTACTTGTCATCGACTATGCCCT CGAGGCCCGTCGTTATTACAGCGCGATGAGACCCTGCGGAACTCTGATGGCTTATCGCCAGCAGAGAGCTAGTGGTGCAT TGCTTCAAGATCCCGGTCGGTGGGATCTCACTGCACATCTGTGTCTCGAAACTCTTCAACTCCAGGCCGAACAGCAGGGT TGGACCTTTCTCGGTGAGTCTCGACAGGGGCAAGCACTCTTGGCACTTGGCTTGGCAGAGAGGCTTCATGCTCTCCAAAG TCTTCCTACCAGTCAGCTCTCTGCTGCCCTCAATAGAAGGGAAGCACTGTTGCGTCTTGTTGATCCAGTCGGCTTGGGAG AGTTTCGTTGGTTGGCTTTTGATTTGAGGCCCAAACCATCTCTTGATGCTGAGGTCGGTGAACTTCGCTGCCGGTTCCTA GAGGACCCAGTTAGCTGA
Upstream 100 bases:
>100_bases GCAACAAAGCAAGCAAAATAACCATGCCAACAGGTTTTTCAAGATTTTTCGCCTCTGATGTGCTCCCATGGGCCTGTTTC AGTGACAGGCATTCTCTCGA
Downstream 100 bases:
>100_bases GCTCTGATAGGCATTTTCGGATTTCTTCTCTGCTTACGTCATTTTTGATTTCGACGTTGCCAATGCCGGTGGGAATCACA AAGCGAAGCTTTCCATCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MDLCSVPCPAWLVNRIVQAGGSISFHQYMDWALHDQVYGAYASGQLRIGRQGDFATSPSLGADFAQLLAIQLVDWFQQLQ QRVDKGKSLSLIEVGPGEGDLSADLISALEDLCPALIPRLELVLVESNKAMALRQRERLKSVTSVPIHWRSLNELAQAPA IGVMLAHEMLDALPVERLVWRDQRLWRQGVCLENVDSVAHLRFTELFLTDALHSALTEARMCLGIQIPPPDAADGWCSEW HGELKSWLSQAASALLCGPLLVIDYALEARRYYSAMRPCGTLMAYRQQRASGALLQDPGRWDLTAHLCLETLQLQAEQQG WTFLGESRQGQALLALGLAERLHALQSLPTSQLSAALNRREALLRLVDPVGLGEFRWLAFDLRPKPSLDAEVGELRCRFL EDPVS
Sequences:
>Translated_405_residues MDLCSVPCPAWLVNRIVQAGGSISFHQYMDWALHDQVYGAYASGQLRIGRQGDFATSPSLGADFAQLLAIQLVDWFQQLQ QRVDKGKSLSLIEVGPGEGDLSADLISALEDLCPALIPRLELVLVESNKAMALRQRERLKSVTSVPIHWRSLNELAQAPA IGVMLAHEMLDALPVERLVWRDQRLWRQGVCLENVDSVAHLRFTELFLTDALHSALTEARMCLGIQIPPPDAADGWCSEW HGELKSWLSQAASALLCGPLLVIDYALEARRYYSAMRPCGTLMAYRQQRASGALLQDPGRWDLTAHLCLETLQLQAEQQG WTFLGESRQGQALLALGLAERLHALQSLPTSQLSAALNRREALLRLVDPVGLGEFRWLAFDLRPKPSLDAEVGELRCRFL EDPVS >Mature_405_residues MDLCSVPCPAWLVNRIVQAGGSISFHQYMDWALHDQVYGAYASGQLRIGRQGDFATSPSLGADFAQLLAIQLVDWFQQLQ QRVDKGKSLSLIEVGPGEGDLSADLISALEDLCPALIPRLELVLVESNKAMALRQRERLKSVTSVPIHWRSLNELAQAPA IGVMLAHEMLDALPVERLVWRDQRLWRQGVCLENVDSVAHLRFTELFLTDALHSALTEARMCLGIQIPPPDAADGWCSEW HGELKSWLSQAASALLCGPLLVIDYALEARRYYSAMRPCGTLMAYRQQRASGALLQDPGRWDLTAHLCLETLQLQAEQQG WTFLGESRQGQALLALGLAERLHALQSLPTSQLSAALNRREALLRLVDPVGLGEFRWLAFDLRPKPSLDAEVGELRCRFL EDPVS
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45018; Mature: 45018
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLCSVPCPAWLVNRIVQAGGSISFHQYMDWALHDQVYGAYASGQLRIGRQGDFATSPSL CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCEECCCEEEECCCCCCCCCCCC GADFAQLLAIQLVDWFQQLQQRVDKGKSLSLIEVGPGEGDLSADLISALEDLCPALIPRL CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCE ELVLVESNKAMALRQRERLKSVTSVPIHWRSLNELAQAPAIGVMLAHEMLDALPVERLVW EEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHH RDQRLWRQGVCLENVDSVAHLRFTELFLTDALHSALTEARMCLGIQIPPPDAADGWCSEW HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHH HGELKSWLSQAASALLCGPLLVIDYALEARRYYSAMRPCGTLMAYRQQRASGALLQDPGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC WDLTAHLCLETLQLQAEQQGWTFLGESRQGQALLALGLAERLHALQSLPTSQLSAALNRR CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH EALLRLVDPVGLGEFRWLAFDLRPKPSLDAEVGELRCRFLEDPVS HHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MDLCSVPCPAWLVNRIVQAGGSISFHQYMDWALHDQVYGAYASGQLRIGRQGDFATSPSL CCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCEECCCEEEECCCCCCCCCCCC GADFAQLLAIQLVDWFQQLQQRVDKGKSLSLIEVGPGEGDLSADLISALEDLCPALIPRL CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCE ELVLVESNKAMALRQRERLKSVTSVPIHWRSLNELAQAPAIGVMLAHEMLDALPVERLVW EEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHH RDQRLWRQGVCLENVDSVAHLRFTELFLTDALHSALTEARMCLGIQIPPPDAADGWCSEW HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHH HGELKSWLSQAASALLCGPLLVIDYALEARRYYSAMRPCGTLMAYRQQRASGALLQDPGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC WDLTAHLCLETLQLQAEQQGWTFLGESRQGQALLALGLAERLHALQSLPTSQLSAALNRR CCHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH EALLRLVDPVGLGEFRWLAFDLRPKPSLDAEVGELRCRFLEDPVS HHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA