The gene/protein map for NC_005071 is currently unavailable.
Definition Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession NC_005071
Length 2,410,873

Click here to switch to the map view.

The map label for this gene is 33862902

Identifier: 33862902

GI number: 33862902

Start: 683438

End: 683812

Strand: Direct

Name: 33862902

Synonym: PMT0629

Alternate gene names: NA

Gene position: 683438-683812 (Clockwise)

Preceding gene: 33862900

Following gene: 33862905

Centisome position: 28.35

GC content: 41.6

Gene sequence:

>375_bases
ATGCCTCAACCACATGTATGGAAGTTAGTTGATTTCATCGGCAGGCTTTGTTTATCCGCTGTTTTTGTTGTCGCAGTTCC
GTCAAAGATTACCAAGTTCTCATCAGTAGTTGAAGCAATCTCAGGGCAAGGGATCCCTGAATCATTAGCACCCTTCTTGT
TGTTGGCAGCAATTGCCTGCCTTATTGTTGGCTCAGTACTTCTTCTATTTGGCAAGAGTCAAAAACTTGGAGCATCACTA
TTACTTATTTTTCTTGTGCCTACGACAGTCATCTTCCATGCATTCCCCTTTCAGCCTAAAGCATTATTTATGAATCTTGG
TTTGACTGGTGGCCTTACTCTAGCCTTGACTAGACCAAAATTCATCGAAAGATAA

Upstream 100 bases:

>100_bases
ATCAGGATTGCTTTCATGAATGCCTTTTTGTAAGGAATCCACACCAATTGGGCCAGTACAACATCATTCGTAGATAATTA
GCAAAGAACCAATCAGACCA

Downstream 100 bases:

>100_bases
TTTTGCTGATAAACATTAAAGTATAGCTTTTTTGTTTTCATCTATTATTCATAATAATAACTCTCTTTTGTCTGGTCAGG
TTAAATAAAAGCTTATATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MPQPHVWKLVDFIGRLCLSAVFVVAVPSKITKFSSVVEAISGQGIPESLAPFLLLAAIACLIVGSVLLLFGKSQKLGASL
LLIFLVPTTVIFHAFPFQPKALFMNLGLTGGLTLALTRPKFIER

Sequences:

>Translated_124_residues
MPQPHVWKLVDFIGRLCLSAVFVVAVPSKITKFSSVVEAISGQGIPESLAPFLLLAAIACLIVGSVLLLFGKSQKLGASL
LLIFLVPTTVIFHAFPFQPKALFMNLGLTGGLTLALTRPKFIER
>Mature_123_residues
PQPHVWKLVDFIGRLCLSAVFVVAVPSKITKFSSVVEAISGQGIPESLAPFLLLAAIACLIVGSVLLLFGKSQKLGASLL
LIFLVPTTVIFHAFPFQPKALFMNLGLTGGLTLALTRPKFIER

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13318; Mature: 13187

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPHVWKLVDFIGRLCLSAVFVVAVPSKITKFSSVVEAISGQGIPESLAPFLLLAAIAC
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LIVGSVLLLFGKSQKLGASLLLIFLVPTTVIFHAFPFQPKALFMNLGLTGGLTLALTRPK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCH
FIER
HHCC
>Mature Secondary Structure 
PQPHVWKLVDFIGRLCLSAVFVVAVPSKITKFSSVVEAISGQGIPESLAPFLLLAAIAC
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LIVGSVLLLFGKSQKLGASLLLIFLVPTTVIFHAFPFQPKALFMNLGLTGGLTLALTRPK
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEEEECCH
FIER
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA