| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862808
Identifier: 33862808
GI number: 33862808
Start: 583469
End: 583837
Strand: Direct
Name: 33862808
Synonym: PMT0535
Alternate gene names: NA
Gene position: 583469-583837 (Clockwise)
Preceding gene: 33862807
Following gene: 33862809
Centisome position: 24.2
GC content: 50.41
Gene sequence:
>369_bases ATGCTCCTGCTGCTAACCCTTTTTATTCCTTACGGCTTTCTCGAAGTAGAAATCGCAAGCGCTGGCCCAGTCGAATGGAA GGAAGTCCCCGCTACTGAAGCTGGACAGCAATGGTGGGATATAGGCAGCCTTCATTACGACAAGGATGGCAATCTCAGCG TGCTTAGTCGCTTTACTCCAGCGCTCAGAGAAGGCGAGAAGCAACAAAATGGCAGCCTCTATTTGATGCATGTGGATTGC GATCAAAAGCTCTTCAGGGATACCTCGGTGAATGGTTTGCATCGTTTCCGCGCAGAATGGAAACCCTCTGATGGCGATGA GCTCATCGATGCAGTCATCGATGAGGTTTGCACTGCAGAGGTGACGTAA
Upstream 100 bases:
>100_bases TGGCCTCACTCTTGCTGCTGCATGGCTGTAAAGCGAAAAAGGCCGCGGGTAAATGAGCAAATCTCTATTCCGATTCTGCC TCTGGCTAGGTCAGGGTTTC
Downstream 100 bases:
>100_bases AAATCAATCATGAATCCAATTCGTCCACCAATTGGTGTTGCTATTGCCGGCCTTGGCTTCGGTGAAAGCGTTCATCTTCC GGCACTAAAAGCCAATCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MLLLLTLFIPYGFLEVEIASAGPVEWKEVPATEAGQQWWDIGSLHYDKDGNLSVLSRFTPALREGEKQQNGSLYLMHVDC DQKLFRDTSVNGLHRFRAEWKPSDGDELIDAVIDEVCTAEVT
Sequences:
>Translated_122_residues MLLLLTLFIPYGFLEVEIASAGPVEWKEVPATEAGQQWWDIGSLHYDKDGNLSVLSRFTPALREGEKQQNGSLYLMHVDC DQKLFRDTSVNGLHRFRAEWKPSDGDELIDAVIDEVCTAEVT >Mature_122_residues MLLLLTLFIPYGFLEVEIASAGPVEWKEVPATEAGQQWWDIGSLHYDKDGNLSVLSRFTPALREGEKQQNGSLYLMHVDC DQKLFRDTSVNGLHRFRAEWKPSDGDELIDAVIDEVCTAEVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13784; Mature: 13784
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLLTLFIPYGFLEVEIASAGPVEWKEVPATEAGQQWWDIGSLHYDKDGNLSVLSRFTP CCEEEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCHHHHHCCH ALREGEKQQNGSLYLMHVDCDQKLFRDTSVNGLHRFRAEWKPSDGDELIDAVIDEVCTAE HHHCCCCCCCCCEEEEEECCCHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCC VT CC >Mature Secondary Structure MLLLLTLFIPYGFLEVEIASAGPVEWKEVPATEAGQQWWDIGSLHYDKDGNLSVLSRFTP CCEEEEHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCEEECCCCCCHHHHHCCH ALREGEKQQNGSLYLMHVDCDQKLFRDTSVNGLHRFRAEWKPSDGDELIDAVIDEVCTAE HHHCCCCCCCCCEEEEEECCCHHHHHCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHCC VT CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA