| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is ftn [H]
Identifier: 33862768
GI number: 33862768
Start: 546694
End: 547227
Strand: Direct
Name: ftn [H]
Synonym: PMT0495
Alternate gene names: 33862768
Gene position: 546694-547227 (Clockwise)
Preceding gene: 33862767
Following gene: 33862769
Centisome position: 22.68
GC content: 46.63
Gene sequence:
>534_bases ATGAATGATCTAACCAAGGCGATCAACCTTCATTTGGCCTGTGAGTTTCAGGCAAGTCATACCTACCTAGCGATGTCAAT TTGGCTTCGCGAGAAGGATTTAGCCGGATTTTCCTCATACATGCAAATTAAGAGCCAAGAGGAACGTGGTCATGCAGATC GACTTATTGCTTACCTTGTTGATTGCGATGAGCAGGTCGAGCTTCCCGCTGTTGAAGCTCCACAACGCAATTGGGGGTCC ACCCAGGATCTCTTTGATCAGGTTTACGAGCTAGAAAAAGATGTAACAGCATCAATTAACCGTATTTATTCCATAGCTGA ACAAGCTGGTGAGCGTAGTGCGACCGCCATGCTCGATTGGTTCATCGCAGAACAGTTACAAGAGGAAGCGGAAGCTCGTT TCGTGCGTAAGCGCCTTCGCCTGGCTGGTGATAACACTGCTGCGCTACTTCTTTTGGATCAACAGTTTCTTGATGGAACT GCCTTGACAACTGTCAAGGGTGGCCTTACTGGATTAAAACAATCTGAGAATTAA
Upstream 100 bases:
>100_bases AAGTGTCCTGCATCCCAGTACTTCTCTATTAGTATGAATAGGCACCCTCCTTTAAACAAGTTCATTTCACCAATGATGGT CTTAAACGTTAAACCTGAGC
Downstream 100 bases:
>100_bases TTCCAAGTTTTTATGATCACTATTTAATAATACTAGAAAACATCTACAGCCAATGCTTGTTGTAGTTTCATTCGCAATCA ATTCCATTGCAATGATCTGG
Product: Ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLVDCDEQVELPAVEAPQRNWGS TQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDWFIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGT ALTTVKGGLTGLKQSEN
Sequences:
>Translated_177_residues MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLVDCDEQVELPAVEAPQRNWGS TQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDWFIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGT ALTTVKGGLTGLKQSEN >Mature_177_residues MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLVDCDEQVELPAVEAPQRNWGS TQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDWFIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGT ALTTVKGGLTGLKQSEN
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=153, Percent_Identity=26.797385620915, Blast_Score=74, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 19959; Mature: 19959
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLV CCCHHHHHEEEEEEEEECCCEEEEEHEEHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHH DCDEQVELPAVEAPQRNWGSTQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDW CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH FIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGTALTTVKGGLTGLKQSEN HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MNDLTKAINLHLACEFQASHTYLAMSIWLREKDLAGFSSYMQIKSQEERGHADRLIAYLV CCCHHHHHEEEEEEEEECCCEEEEEHEEHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHH DCDEQVELPAVEAPQRNWGSTQDLFDQVYELEKDVTASINRIYSIAEQAGERSATAMLDW CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH FIAEQLQEEAEARFVRKRLRLAGDNTAALLLLDQQFLDGTALTTVKGGLTGLKQSEN HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8809765; 10688204 [H]