| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33862767
Identifier: 33862767
GI number: 33862767
Start: 545484
End: 546167
Strand: Direct
Name: 33862767
Synonym: PMT0494
Alternate gene names: NA
Gene position: 545484-546167 (Clockwise)
Preceding gene: 33862764
Following gene: 33862768
Centisome position: 22.63
GC content: 46.49
Gene sequence:
>684_bases ATGGAAAAAGGCAAATATCGACTTATTATTTTGCTTCCCCAGTTAGGTGACTTTGACAGCCTCGAATATGCTCAAGCGCT AGTAGCTGATATGCCAAGGCTAAGGGCTGCTGGGATCTCCACTTTGGCCATAGGCATAGGCAACGCTGAGAGTGCGGAAC GATTCTGCACCTTTACTGGCTTTCCTAAGCAAAATATGTTGGTAGATGAGGAACCGACACTCCACAGAGAGCTGGGTCTC TATGGCGGACTAAAAACACTTGGTGGCCCTTGGCCTGCATTGTTTTTAATGTGCGCAGGCATTGGTTCTCCAGGCACCCT GTCTGAAGTACTACGTGGCTACACAGGAGATCGTAATGCACCCCAGCGAATCGCGAATAACGAAACCATCAATATCTCCC CATTCCCATCCGTAAGAGGATCCTTTTTCAGGCGAGCTGGTGGTGAGGGTTTTCAAAGACCATTTGAACTCGCTACTATT CGACTCCGAAACATGATAGAAGTGCTAAGTAACTTGGGTACTTACTTACCTCGTGACGACTTCATTACACAACGGGGCGG TACTTATTTACTAGATTGTGACGACACACTTTTATATAGCCACCAAGACAAGGGGATCCTCGGATTCTCAGAAACAATGG CCAAACCCCTTTCTTTCCTAGGCCAATATCTAGATAAGAATTAA
Upstream 100 bases:
>100_bases GTACGCTAATTGAGGCGCAAACTAATCTCACAATCCTAACGACGTGTGCACAGTAAAAGCACCCCTTCCACTGCTTCAAA GACTGAGTCAGGTGCCAGGC
Downstream 100 bases:
>100_bases TATGAATAAAATATCAACTCCAATGTTCTAATAATTCAGACTTGCTTGCTAACTTTCGATTTGGCGACTAGTATAGATAA AACAACCATAATAATATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MEKGKYRLIILLPQLGDFDSLEYAQALVADMPRLRAAGISTLAIGIGNAESAERFCTFTGFPKQNMLVDEEPTLHRELGL YGGLKTLGGPWPALFLMCAGIGSPGTLSEVLRGYTGDRNAPQRIANNETINISPFPSVRGSFFRRAGGEGFQRPFELATI RLRNMIEVLSNLGTYLPRDDFITQRGGTYLLDCDDTLLYSHQDKGILGFSETMAKPLSFLGQYLDKN
Sequences:
>Translated_227_residues MEKGKYRLIILLPQLGDFDSLEYAQALVADMPRLRAAGISTLAIGIGNAESAERFCTFTGFPKQNMLVDEEPTLHRELGL YGGLKTLGGPWPALFLMCAGIGSPGTLSEVLRGYTGDRNAPQRIANNETINISPFPSVRGSFFRRAGGEGFQRPFELATI RLRNMIEVLSNLGTYLPRDDFITQRGGTYLLDCDDTLLYSHQDKGILGFSETMAKPLSFLGQYLDKN >Mature_227_residues MEKGKYRLIILLPQLGDFDSLEYAQALVADMPRLRAAGISTLAIGIGNAESAERFCTFTGFPKQNMLVDEEPTLHRELGL YGGLKTLGGPWPALFLMCAGIGSPGTLSEVLRGYTGDRNAPQRIANNETINISPFPSVRGSFFRRAGGEGFQRPFELATI RLRNMIEVLSNLGTYLPRDDFITQRGGTYLLDCDDTLLYSHQDKGILGFSETMAKPLSFLGQYLDKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25049; Mature: 25049
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKGKYRLIILLPQLGDFDSLEYAQALVADMPRLRAAGISTLAIGIGNAESAERFCTFTG CCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHCCCEEEEEECCCCCCHHHEEEECC FPKQNMLVDEEPTLHRELGLYGGLKTLGGPWPALFLMCAGIGSPGTLSEVLRGYTGDRNA CCCCCCEECCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC PQRIANNETINISPFPSVRGSFFRRAGGEGFQRPFELATIRLRNMIEVLSNLGTYLPRDD HHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH FITQRGGTYLLDCDDTLLYSHQDKGILGFSETMAKPLSFLGQYLDKN HHHCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKGKYRLIILLPQLGDFDSLEYAQALVADMPRLRAAGISTLAIGIGNAESAERFCTFTG CCCCCEEEEEEECCCCCCCHHHHHHHHHHHCHHHHHCCCEEEEEECCCCCCHHHEEEECC FPKQNMLVDEEPTLHRELGLYGGLKTLGGPWPALFLMCAGIGSPGTLSEVLRGYTGDRNA CCCCCCEECCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCCC PQRIANNETINISPFPSVRGSFFRRAGGEGFQRPFELATIRLRNMIEVLSNLGTYLPRDD HHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH FITQRGGTYLLDCDDTLLYSHQDKGILGFSETMAKPLSFLGQYLDKN HHHCCCCEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA