| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862758
Identifier: 33862758
GI number: 33862758
Start: 537524
End: 538030
Strand: Direct
Name: 33862758
Synonym: PMT0485
Alternate gene names: NA
Gene position: 537524-538030 (Clockwise)
Preceding gene: 33862752
Following gene: 33862759
Centisome position: 22.3
GC content: 43.59
Gene sequence:
>507_bases TTGGTTCGCCCACAGTCAGGTAGCTTTGAATTAGTAAAGGGCCTAAAACAGGTTATGAACCCGATGCGTAAATTTTCTAA GTATTTTTTTTCTATCTTTCTTGCTGCAATACTTCTCTTCTCTTCTGTTTCTGCTCAACCGCCAGCCTTTGCAGACGACT ACGAGCTGTCCCCTGCGGTATCGGAGGTGGGCGAGACTTTCTCTGATAAGTACTGTGTTGCGATCTCAGACGGAACCCCT GCAGATCAAGCTCCCTTAGTTGCCGGGCGTCAAATGATAAGTAGCTTAATGCGCTCAGGTGCTTTAAATGAAGTCATGGC AGTTCCAAAAGAAGATATGGCTTCATTCATCGCCGCGAATATTTTCGAGACATGCGGAGATAACATTGGCATTTCCGAGT TAGAGCTTAATGCTTCTATCCTTAATCTTGCAAATCAAGGCCCTAGACAATCTCAAGCCAAGCCTTTTAACCCTTCTTCG TTAATCAATAAAAACCTAAATACATAG
Upstream 100 bases:
>100_bases GCTACCTAAGCTTGTTGCAATCGCATTCAAGCTGAAAGAAAAGATTTACTTTGTCCTTAGCATTAAATCAATAATCGCTT CAGCTTCTTCATTTAGGTGG
Downstream 100 bases:
>100_bases GCCCTAGTGAAGATACTCATTCAACCCAATAGCAGAGAACTTCCGTCACGTTAGGCTATTAGGAAGTATTTATCCAGATA AAGCAACAGGCAGACTCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MVRPQSGSFELVKGLKQVMNPMRKFSKYFFSIFLAAILLFSSVSAQPPAFADDYELSPAVSEVGETFSDKYCVAISDGTP ADQAPLVAGRQMISSLMRSGALNEVMAVPKEDMASFIAANIFETCGDNIGISELELNASILNLANQGPRQSQAKPFNPSS LINKNLNT
Sequences:
>Translated_168_residues MVRPQSGSFELVKGLKQVMNPMRKFSKYFFSIFLAAILLFSSVSAQPPAFADDYELSPAVSEVGETFSDKYCVAISDGTP ADQAPLVAGRQMISSLMRSGALNEVMAVPKEDMASFIAANIFETCGDNIGISELELNASILNLANQGPRQSQAKPFNPSS LINKNLNT >Mature_168_residues MVRPQSGSFELVKGLKQVMNPMRKFSKYFFSIFLAAILLFSSVSAQPPAFADDYELSPAVSEVGETFSDKYCVAISDGTP ADQAPLVAGRQMISSLMRSGALNEVMAVPKEDMASFIAANIFETCGDNIGISELELNASILNLANQGPRQSQAKPFNPSS LINKNLNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18133; Mature: 18133
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRPQSGSFELVKGLKQVMNPMRKFSKYFFSIFLAAILLFSSVSAQPPAFADDYELSPAV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH SEVGETFSDKYCVAISDGTPADQAPLVAGRQMISSLMRSGALNEVMAVPKEDMASFIAAN HHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH IFETCGDNIGISELELNASILNLANQGPRQSQAKPFNPSSLINKNLNT HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MVRPQSGSFELVKGLKQVMNPMRKFSKYFFSIFLAAILLFSSVSAQPPAFADDYELSPAV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH SEVGETFSDKYCVAISDGTPADQAPLVAGRQMISSLMRSGALNEVMAVPKEDMASFIAAN HHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHH IFETCGDNIGISELELNASILNLANQGPRQSQAKPFNPSSLINKNLNT HHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA