| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862719
Identifier: 33862719
GI number: 33862719
Start: 504168
End: 505175
Strand: Direct
Name: 33862719
Synonym: PMT0446
Alternate gene names: NA
Gene position: 504168-505175 (Clockwise)
Preceding gene: 33862718
Following gene: 33862720
Centisome position: 20.91
GC content: 54.17
Gene sequence:
>1008_bases TTGACTCCTGCCCGGATCCTGATCACAGGAGCCAGCGGCTGTGTTGGGCAGTACACAGCCGCCTGGCTACTTGAAAACTC CGATGCCGAGTTACTGCTCTGGCTCAGAGACCCGGCCAAACTCACGGCCATCTCAGCGCAACACCCACGTGTTCAACTGC TGGTAGGAGATTTACGTGACCCCCATTGTTTTGCTAATCAGCTAGCCACGGTCAGCCGTGTGATTCATACGGCAACGGCC TGGGGGGATCCAGAGCGAGCCCATCAAGTGAATGTTGTGGCTGTTAAAACTCTGCTCGGGCTTCTCAATCCAGAGGTTCT TGAGCAGATCACCTATTTCTCTACGGCAAGCATCCTCAATCGGGATCTTCAGCCATTGCCAGAAGCTCTTGCGTATGGCA CTGAATACATTCAAACCAAGGCTCAGTGCCTCCAGGACCTTGAGCACCATCCGTTGGCTGATCGGATCGTGGCTGTTTTC CCTACGCTCGTTTTCGGGGGAAGGGTCGATGGCACGAGCCCATTCCCTACCAGCTATCTCACTGAAGGGTTAGAAGAAGC AAGCCGCTGGCTTTGGTTGGCACGCTGGCTAAGGGCTGATGCCAGCTTTCATTTCATTCATGCAGCTGATATTGCTTGCA TATGTGGCCACTTGGCAACGACCCCCAAACTTCCCAATCGAGAGGCTGGGCAGGGAGCTGTTCGGCGTTTGGTTATGGGT CAACCCTCGATCTCTGTGAATCAAGCTATAGCGACTCTTTGTCGCTGGCGTGGGCTCAGGCAGACGCCTGGTTTACCCCT CTGGGGTTGGCTGATTGAGGCTCTGATCAAGGTGCTACCGATCGAAATCAATGCATGGGATCGCTTCAGCATCAAACAAA GGCACTTTGTGCATGATCCAATTACGACACCAGAACGTGTCGGAGGTCACAGCCATGCAGCCACACTTGAAGCCGTGTTG GCAGATTCAGGACTGCCGCAGCGCGGAAAACTTCACAATCAGGGCTAA
Upstream 100 bases:
>100_bases TCAACCTCGGCCATGGCATCCTGCCTGGAACACCTGAGGACAATGCCAAAGTGTTTTTCGAAACTGGCAAGACTGTTGAC AATCTGATCGGATCTGCCGC
Downstream 100 bases:
>100_bases AGTGCTCCTAGAAATCATGTAAGCTCTCATGGCCTCAATGCTTCGCTCTATCGCAGCAGCAGCTTGCGCTTTGTTTTTGG TGATTGGGCTTGGAGTCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; NmrA Family Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerases
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MTPARILITGASGCVGQYTAAWLLENSDAELLLWLRDPAKLTAISAQHPRVQLLVGDLRDPHCFANQLATVSRVIHTATA WGDPERAHQVNVVAVKTLLGLLNPEVLEQITYFSTASILNRDLQPLPEALAYGTEYIQTKAQCLQDLEHHPLADRIVAVF PTLVFGGRVDGTSPFPTSYLTEGLEEASRWLWLARWLRADASFHFIHAADIACICGHLATTPKLPNREAGQGAVRRLVMG QPSISVNQAIATLCRWRGLRQTPGLPLWGWLIEALIKVLPIEINAWDRFSIKQRHFVHDPITTPERVGGHSHAATLEAVL ADSGLPQRGKLHNQG
Sequences:
>Translated_335_residues MTPARILITGASGCVGQYTAAWLLENSDAELLLWLRDPAKLTAISAQHPRVQLLVGDLRDPHCFANQLATVSRVIHTATA WGDPERAHQVNVVAVKTLLGLLNPEVLEQITYFSTASILNRDLQPLPEALAYGTEYIQTKAQCLQDLEHHPLADRIVAVF PTLVFGGRVDGTSPFPTSYLTEGLEEASRWLWLARWLRADASFHFIHAADIACICGHLATTPKLPNREAGQGAVRRLVMG QPSISVNQAIATLCRWRGLRQTPGLPLWGWLIEALIKVLPIEINAWDRFSIKQRHFVHDPITTPERVGGHSHAATLEAVL ADSGLPQRGKLHNQG >Mature_334_residues TPARILITGASGCVGQYTAAWLLENSDAELLLWLRDPAKLTAISAQHPRVQLLVGDLRDPHCFANQLATVSRVIHTATAW GDPERAHQVNVVAVKTLLGLLNPEVLEQITYFSTASILNRDLQPLPEALAYGTEYIQTKAQCLQDLEHHPLADRIVAVFP TLVFGGRVDGTSPFPTSYLTEGLEEASRWLWLARWLRADASFHFIHAADIACICGHLATTPKLPNREAGQGAVRRLVMGQ PSISVNQAIATLCRWRGLRQTPGLPLWGWLIEALIKVLPIEINAWDRFSIKQRHFVHDPITTPERVGGHSHAATLEAVLA DSGLPQRGKLHNQG
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36933; Mature: 36802
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPARILITGASGCVGQYTAAWLLENSDAELLLWLRDPAKLTAISAQHPRVQLLVGDLRD CCCCEEEEECCCCCCHHHHEEEEEECCCCEEEEEEECCCCEEEECCCCCEEEEEECCCCC PHCFANQLATVSRVIHTATAWGDPERAHQVNVVAVKTLLGLLNPEVLEQITYFSTASILN CHHHHHHHHHHHHHHHHHHCCCCCHHHHEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RDLQPLPEALAYGTEYIQTKAQCLQDLEHHPLADRIVAVFPTLVFGGRVDGTSPFPTSYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH TEGLEEASRWLWLARWLRADASFHFIHAADIACICGHLATTPKLPNREAGQGAVRRLVMG HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC QPSISVNQAIATLCRWRGLRQTPGLPLWGWLIEALIKVLPIEINAWDRFSIKQRHFVHDP CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCHHHCCCCC ITTPERVGGHSHAATLEAVLADSGLPQRGKLHNQG CCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TPARILITGASGCVGQYTAAWLLENSDAELLLWLRDPAKLTAISAQHPRVQLLVGDLRD CCCEEEEECCCCCCHHHHEEEEEECCCCEEEEEEECCCCEEEECCCCCEEEEEECCCCC PHCFANQLATVSRVIHTATAWGDPERAHQVNVVAVKTLLGLLNPEVLEQITYFSTASILN CHHHHHHHHHHHHHHHHHHCCCCCHHHHEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH RDLQPLPEALAYGTEYIQTKAQCLQDLEHHPLADRIVAVFPTLVFGGRVDGTSPFPTSYL CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHH TEGLEEASRWLWLARWLRADASFHFIHAADIACICGHLATTPKLPNREAGQGAVRRLVMG HHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC QPSISVNQAIATLCRWRGLRQTPGLPLWGWLIEALIKVLPIEINAWDRFSIKQRHFVHDP CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEECCCCCCCCCHHHCCCCC ITTPERVGGHSHAATLEAVLADSGLPQRGKLHNQG CCCHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA