| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is thrB [H]
Identifier: 33862699
GI number: 33862699
Start: 477746
End: 478696
Strand: Direct
Name: thrB [H]
Synonym: PMT0426
Alternate gene names: 33862699
Gene position: 477746-478696 (Clockwise)
Preceding gene: 33862698
Following gene: 161350045
Centisome position: 19.82
GC content: 57.41
Gene sequence:
>951_bases ATGGCGCAGCCGAGTATCGGCCAAAGAATTGTGGTTGACGTACCGTCCACCACAGCCAACCTTGGCCCTGGCTTCGACTG CCTTGGTGCTGCCCTTGACCTCAACAACCGTTTTGCCATGCGGCGGATCGAAGGGGATAGCGGACGCTTTGAACTCATTA TTGAAGGCAATGAGGGAAGCCACCTACGCGGTGGGCCCAATAACCTGATTTATCGCGCCGCCCAGAGGGTGTGGAAAGCC GCAGGGCTCGAACCGGTGGGACTAGAAGCCAAAGTGAGGCTCGCGGTACCCCCCGCAAGAGGCCTAGGAAGCAGTGCCAG TGCCATCGTGGCAGGGTTGGTCGGAGCCAATGCCTTGGTGGGCGAACCGCTCAGCAAAGAAAAACTGTTGGAACTGGCCA TTGATATTGAGGGACATCCCGACAATGTGGTTCCTTCTCTTCTGGGAGGTCTTTGCTTGACTGCCAAGGCAGCCTCGCAA CGCTGGCGGGTGGTTCGTTGTGTCTGGATCAATTCCGTGAAAGCCGTTGTAGCAATCCCCTCTATTCGCCTAAGCACGAG CGAGGCAAGGCGCGCCATGCCTAAAGACATCCCGATCAGCGATGCCGTAGAAAACCTTGGTGCCCTTACGCTCCTGCTGC AGGGACTGCGGACAGGAAACGGCGACCTGATCACAGATGGGATGCACGATCGACTGCATGAGCCCTATCGCTGGCCATTA ATCAAAGGTGGTTTGGATGTTCGCGATGCGGCTCTGAATGCCGGTGCCTGGGGTTGTGCCATCAGCGGAGCTGGCCCCAG CGTGCTGGCTCTTTGCCCTGAGGATAAAGGGCAAGCAGTCAGTCAGGCAATGGTAAAAGCTTGGGAGGCCGAGGGTGTAG CAAGTAGGGCTCCACTGCTTAGCATTCAGTCAGGAGGAAGCCACTGGCAACCTCAGATTGAGGATGAGTAG
Upstream 100 bases:
>100_bases TGGCAGTGATCGATCCCGAGGTGGGCCTGTTCAGTGCAGCCTGCAGAGCACACATGCTTGCTGAGCAAGGTGGGACACTG ACCTAAGTAGACAAGTAGGG
Downstream 100 bases:
>100_bases ATATACTCAAGCGCCCGCCCGGGGTTGATCAGTTCCTTCGCATTCTCTTGCCTGCCATGGACGCCAATTTGCCGCTGACG GCTGCGTCCCAGGCCTCATT
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MAQPSIGQRIVVDVPSTTANLGPGFDCLGAALDLNNRFAMRRIEGDSGRFELIIEGNEGSHLRGGPNNLIYRAAQRVWKA AGLEPVGLEAKVRLAVPPARGLGSSASAIVAGLVGANALVGEPLSKEKLLELAIDIEGHPDNVVPSLLGGLCLTAKAASQ RWRVVRCVWINSVKAVVAIPSIRLSTSEARRAMPKDIPISDAVENLGALTLLLQGLRTGNGDLITDGMHDRLHEPYRWPL IKGGLDVRDAALNAGAWGCAISGAGPSVLALCPEDKGQAVSQAMVKAWEAEGVASRAPLLSIQSGGSHWQPQIEDE
Sequences:
>Translated_316_residues MAQPSIGQRIVVDVPSTTANLGPGFDCLGAALDLNNRFAMRRIEGDSGRFELIIEGNEGSHLRGGPNNLIYRAAQRVWKA AGLEPVGLEAKVRLAVPPARGLGSSASAIVAGLVGANALVGEPLSKEKLLELAIDIEGHPDNVVPSLLGGLCLTAKAASQ RWRVVRCVWINSVKAVVAIPSIRLSTSEARRAMPKDIPISDAVENLGALTLLLQGLRTGNGDLITDGMHDRLHEPYRWPL IKGGLDVRDAALNAGAWGCAISGAGPSVLALCPEDKGQAVSQAMVKAWEAEGVASRAPLLSIQSGGSHWQPQIEDE >Mature_315_residues AQPSIGQRIVVDVPSTTANLGPGFDCLGAALDLNNRFAMRRIEGDSGRFELIIEGNEGSHLRGGPNNLIYRAAQRVWKAA GLEPVGLEAKVRLAVPPARGLGSSASAIVAGLVGANALVGEPLSKEKLLELAIDIEGHPDNVVPSLLGGLCLTAKAASQR WRVVRCVWINSVKAVVAIPSIRLSTSEARRAMPKDIPISDAVENLGALTLLLQGLRTGNGDLITDGMHDRLHEPYRWPLI KGGLDVRDAALNAGAWGCAISGAGPSVLALCPEDKGQAVSQAMVKAWEAEGVASRAPLLSIQSGGSHWQPQIEDE
Specific function: Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate [H]
COG id: COG0083
COG function: function code E; Homoserine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GHMP kinase family. Homoserine kinase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786184, Length=281, Percent_Identity=30.9608540925267, Blast_Score=105, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6321814, Length=356, Percent_Identity=30.0561797752809, Blast_Score=142, Evalue=5e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006204 - InterPro: IPR013750 - InterPro: IPR006203 - InterPro: IPR000870 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF08544 GHMP_kinases_C; PF00288 GHMP_kinases_N [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 33235; Mature: 33103
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: PS00627 GHMP_KINASES_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQPSIGQRIVVDVPSTTANLGPGFDCLGAALDLNNRFAMRRIEGDSGRFELIIEGNEGS CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCC HLRGGPNNLIYRAAQRVWKAAGLEPVGLEAKVRLAVPPARGLGSSASAIVAGLVGANALV CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHH GEPLSKEKLLELAIDIEGHPDNVVPSLLGGLCLTAKAASQRWRVVRCVWINSVKAVVAIP CCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEC SIRLSTSEARRAMPKDIPISDAVENLGALTLLLQGLRTGNGDLITDGMHDRLHEPYRWPL CEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCCCCE IKGGLDVRDAALNAGAWGCAISGAGPSVLALCPEDKGQAVSQAMVKAWEAEGVASRAPLL EECCCCHHHHHHCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEE SIQSGGSHWQPQIEDE EEECCCCCCCCCCCCC >Mature Secondary Structure AQPSIGQRIVVDVPSTTANLGPGFDCLGAALDLNNRFAMRRIEGDSGRFELIIEGNEGS CCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCC HLRGGPNNLIYRAAQRVWKAAGLEPVGLEAKVRLAVPPARGLGSSASAIVAGLVGANALV CCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCHHH GEPLSKEKLLELAIDIEGHPDNVVPSLLGGLCLTAKAASQRWRVVRCVWINSVKAVVAIP CCCCCHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEC SIRLSTSEARRAMPKDIPISDAVENLGALTLLLQGLRTGNGDLITDGMHDRLHEPYRWPL CEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCCCCCCE IKGGLDVRDAALNAGAWGCAISGAGPSVLALCPEDKGQAVSQAMVKAWEAEGVASRAPLL EECCCCHHHHHHCCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEE SIQSGGSHWQPQIEDE EEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA