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The map label for this gene is bepF [H]

Identifier: 33862403

GI number: 33862403

Start: 148790

End: 149980

Strand: Reverse

Name: bepF [H]

Synonym: PMT0130

Alternate gene names: 33862403

Gene position: 149980-148790 (Counterclockwise)

Preceding gene: 33862407

Following gene: 33862402

Centisome position: 6.22

GC content: 49.2

Gene sequence:

>1191_bases
ATGCAAGGAAGGTTATCGTCCGCAAAAAAGAAAGTTCTGATGGCATCTAGCTCCACCACCTTTGCCCTGCTAGGGGCCGT
CTTGATGGTGACGAGCTGCAGCCATAACCATAAGGCTACTCACAAATTCATGACGGTTGAGGCAACCCGAATCACCTCAA
CCAATTTTGAGCCAATGGTCAGTGCCGTCAGCATGCTGGAGTCGACCAAAAACGTGGCCTTAAAACCACAGACCGACGGC
ACAGTGGTCAAAATCCTCGCCAAGGATGGGCAACGCGTTAAAGCTGGTCAAACCATCCTGGTGCTCGACAACGAGCAACA
AAGTGCTGCCCTGGACTCCGCCCAATCCGAAGCAAAGAAAGACCAACTCAATGCTGAGCGTTATGAATTCCTCTACCAGC
AGGGTGCAACATCAGCCAAGACTCGCGACAAATATGCAGTGCAGGCAATCCAGTCGCGAGATCAGGCAAAAGCCGATGCA
GCCACCCTCGGCTACAAATTCGTACGCGCACCAATCAATGGCCTAATCGGTGATCTGGACAAAGTGAAACTTGGCGACTA
CGTGAAGAAAGGGCAAACCATTACAGGCATCGTTGACGATTCGATGCTGTGGACAATGATGCAAATCCCTGCAACGCAAG
CCAACCAGGTGCAACTGGGGCAAACAGTGATGGTTGCATCCCAAACCACACCACCTTTAACAGGGCAGGGCTCCGTTGTC
TTTATCTCGCCGTATTACGAGCTGAATGGAACAAATAAGTCTCCAAACACACTCATGGTGAAAGCAGCCTTTCCCAACCT
CACTGGTAAGTTAAAAACTGGACAATTTGTCAAAAGTCAGATCGTGACGGGGAAATTTACAAGCCTTGCTGTTCCTGTTC
AAGCGGTATTTATGGAGGCCCAACAACCATTTGTCTACGTTGTTGTCCCACTAAGCAAAGCACTCCCAAAAATCAAAGCA
TCAAGCTCATTACCCGAAGCAACCAAAAAGAAGCTCGAATCATTACCTACTAACACACCGATTGTGTTGCAAAAAGCTGT
CACCCTGGGCCAACTGCAAAACAACCTCTACCCATTGAAATCAGGCCTGCAAAAAGGCGAGCAAGTTGTTTCAAGCAACA
CAGCACTACTGCGTAACGGCATGGCCGTGAAGATTGCGCCAACACAAGCCACCAAGAAAAGAAGCAACTGA

Upstream 100 bases:

>100_bases
ATGCAGCCCACAAAGGTCAAACAACCCTAAAGAAACTCATGGGTCAGAGAGTAGGCGCACCTAACGTTCATCACGGGTGA
ACCTTCGCCAGAGCATCTAG

Downstream 100 bases:

>100_bases
ATAAAGCATGGCGTTCTCCGACAATTTCATCAAAAGACCAGTTCTGACGACAGTCTGCAGCATCCTCATCGTGCTGGTAG
GCATTATCGCAATCCCTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MQGRLSSAKKKVLMASSSTTFALLGAVLMVTSCSHNHKATHKFMTVEATRITSTNFEPMVSAVSMLESTKNVALKPQTDG
TVVKILAKDGQRVKAGQTILVLDNEQQSAALDSAQSEAKKDQLNAERYEFLYQQGATSAKTRDKYAVQAIQSRDQAKADA
ATLGYKFVRAPINGLIGDLDKVKLGDYVKKGQTITGIVDDSMLWTMMQIPATQANQVQLGQTVMVASQTTPPLTGQGSVV
FISPYYELNGTNKSPNTLMVKAAFPNLTGKLKTGQFVKSQIVTGKFTSLAVPVQAVFMEAQQPFVYVVVPLSKALPKIKA
SSSLPEATKKKLESLPTNTPIVLQKAVTLGQLQNNLYPLKSGLQKGEQVVSSNTALLRNGMAVKIAPTQATKKRSN

Sequences:

>Translated_396_residues
MQGRLSSAKKKVLMASSSTTFALLGAVLMVTSCSHNHKATHKFMTVEATRITSTNFEPMVSAVSMLESTKNVALKPQTDG
TVVKILAKDGQRVKAGQTILVLDNEQQSAALDSAQSEAKKDQLNAERYEFLYQQGATSAKTRDKYAVQAIQSRDQAKADA
ATLGYKFVRAPINGLIGDLDKVKLGDYVKKGQTITGIVDDSMLWTMMQIPATQANQVQLGQTVMVASQTTPPLTGQGSVV
FISPYYELNGTNKSPNTLMVKAAFPNLTGKLKTGQFVKSQIVTGKFTSLAVPVQAVFMEAQQPFVYVVVPLSKALPKIKA
SSSLPEATKKKLESLPTNTPIVLQKAVTLGQLQNNLYPLKSGLQKGEQVVSSNTALLRNGMAVKIAPTQATKKRSN
>Mature_396_residues
MQGRLSSAKKKVLMASSSTTFALLGAVLMVTSCSHNHKATHKFMTVEATRITSTNFEPMVSAVSMLESTKNVALKPQTDG
TVVKILAKDGQRVKAGQTILVLDNEQQSAALDSAQSEAKKDQLNAERYEFLYQQGATSAKTRDKYAVQAIQSRDQAKADA
ATLGYKFVRAPINGLIGDLDKVKLGDYVKKGQTITGIVDDSMLWTMMQIPATQANQVQLGQTVMVASQTTPPLTGQGSVV
FISPYYELNGTNKSPNTLMVKAAFPNLTGKLKTGQFVKSQIVTGKFTSLAVPVQAVFMEAQQPFVYVVVPLSKALPKIKA
SSSLPEATKKKLESLPTNTPIVLQKAVTLGQLQNNLYPLKSGLQKGEQVVSSNTALLRNGMAVKIAPTQATKKRSN

Specific function: May contribute to resistance to some drugs, such as deoxycholate, sodium dodecyl sulfate and nalidixic acid, in the absence of BepD and BepE [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 42657; Mature: 42657

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGRLSSAKKKVLMASSSTTFALLGAVLMVTSCSHNHKATHKFMTVEATRITSTNFEPMV
CCCCHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHH
SAVSMLESTKNVALKPQTDGTVVKILAKDGQRVKAGQTILVLDNEQQSAALDSAQSEAKK
HHHHHHHHCCCEEECCCCCCCEEEEEECCCCEEECCCEEEEEECCHHHHHHHHHHHHHHH
DQLNAERYEFLYQQGATSAKTRDKYAVQAIQSRDQAKADAATLGYKFVRAPINGLIGDLD
HHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KVKLGDYVKKGQTITGIVDDSMLWTMMQIPATQANQVQLGQTVMVASQTTPPLTGQGSVV
HHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCEECCCEEEEEECCCCCCCCCCCEE
FISPYYELNGTNKSPNTLMVKAAFPNLTGKLKTGQFVKSQIVTGKFTSLAVPVQAVFMEA
EEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHC
QQPFVYVVVPLSKALPKIKASSSLPEATKKKLESLPTNTPIVLQKAVTLGQLQNNLYPLK
CCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHH
SGLQKGEQVVSSNTALLRNGMAVKIAPTQATKKRSN
HHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MQGRLSSAKKKVLMASSSTTFALLGAVLMVTSCSHNHKATHKFMTVEATRITSTNFEPMV
CCCCHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEECCCHHHHH
SAVSMLESTKNVALKPQTDGTVVKILAKDGQRVKAGQTILVLDNEQQSAALDSAQSEAKK
HHHHHHHHCCCEEECCCCCCCEEEEEECCCCEEECCCEEEEEECCHHHHHHHHHHHHHHH
DQLNAERYEFLYQQGATSAKTRDKYAVQAIQSRDQAKADAATLGYKFVRAPINGLIGDLD
HHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KVKLGDYVKKGQTITGIVDDSMLWTMMQIPATQANQVQLGQTVMVASQTTPPLTGQGSVV
HHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCCCEECCCEEEEEECCCCCCCCCCCEE
FISPYYELNGTNKSPNTLMVKAAFPNLTGKLKTGQFVKSQIVTGKFTSLAVPVQAVFMEA
EEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHC
QQPFVYVVVPLSKALPKIKASSSLPEATKKKLESLPTNTPIVLQKAVTLGQLQNNLYPLK
CCCEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHH
SGLQKGEQVVSSNTALLRNGMAVKIAPTQATKKRSN
HHHHHHHHHHHCCHHHHHCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]