| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is sgaB
Identifier: 30065565
GI number: 30065565
Start: 4517831
End: 4518136
Strand: Direct
Name: sgaB
Synonym: S4619
Alternate gene names: 30065565
Gene position: 4517831-4518136 (Clockwise)
Preceding gene: 161486366
Following gene: 30065566
Centisome position: 98.23
GC content: 50.98
Gene sequence:
>306_bases ATGACCGTACGTATTCTGGCTGTGTGTGGCAACGGACAAGGCAGTTCCATGATCATGAAGATGAAAGTGGACCAGTTTTT AACCCAATCAAACATTGACCACACGGTAAATAGCTGCGCGGTTGGCGAATACAAAAGCGAGTTGAGCGGCGCGGATATCA TCATCGCTTCTACGCACATTGCGGGCGAAATCACCGTGACCGGCAACAAATACGTGGTTGGCGTGCGCAACATGCTCTCT CCTGCCGACTTTGGCCCGAAACTGCTGGAAGTGATCAAAGCGCATTTCCCGCAGGATGTGAAGTAA
Upstream 100 bases:
>100_bases TGCACTGGCTTATATGTTCTTCGCTGGCCGCGCACTGCGCGCAGAAGAAGATGCAGAAAAACAATTGGCAGAACAGTCTG CTTAATAAGGAGTTTTGATT
Downstream 100 bases:
>100_bases GGACGCGCCATGAAATTACATGATTCGCTGGCGGAGAATAAATCCATCCGCCTGCAGGCTGAAGCTGAGACATGGCAGGA CGCAGTAAAAATCGGCGTTG
Product: PTS system L-ascorbate-specific transporter subunit IIB
Products: NA
Alternate protein names: Ascorbate-specific PTS system EIIB component [H]
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLS PADFGPKLLEVIKAHFPQDVK
Sequences:
>Translated_101_residues MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLS PADFGPKLLEVIKAHFPQDVK >Mature_100_residues TVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLSP ADFGPKLLEVIKAHFPQDVK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3414
COG function: function code G; Phosphotransferase system, galactitol-specific IIB component
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790638, Length=101, Percent_Identity=99.009900990099, Blast_Score=207, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 10838; Mature: 10707
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHI CEEEEEEEECCCCCCEEEEEEEHHHHHHHCCCCCCCCCEECCCHHHHCCCCEEEEEECCC AGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKAHFPQDVK EEEEEECCCEEEEEECHHCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure TVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEYKSELSGADIIIASTHI EEEEEEEECCCCCCEEEEEEEHHHHHHHCCCCCCCCCEECCCHHHHCCCCEEEEEECCC AGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKAHFPQDVK EEEEEECCCEEEEEECHHCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]