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The map label for this gene is yibQ

Identifier: 30065110

GI number: 30065110

Start: 4013561

End: 4014394

Strand: Reverse

Name: yibQ

Synonym: S4115

Alternate gene names: 30065110

Gene position: 4014394-4013561 (Counterclockwise)

Preceding gene: 161486389

Following gene: 30065104

Centisome position: 87.28

GC content: 52.76

Gene sequence:

>834_bases
GTGCTGGCGATGCCTTCCGCTATCTCCGTCGCTGTATTACCCGATTCACCGCACGCCAGAGAGATGGCGACCAAAGCGCA
TAACAGCGGTCACGAAGTGTTGATTCATCTCCCGATGGCACCGTTGAGTAAACAGCCGCTGGAGAAAAATACGCTACGCC
CGGAGATGAGCAGCGACGAAATTGAGCGCATTATTCGTAGTGCGGTCAATAACGTGCCCTATGCCGTGGGGATCAACAAC
CACATGGGCAGCAAGATGACCTCTAACCTGTTTGGTATGCAGAAAGTGATGCAGGCGCTGGAGCGTTACAATCTTTACTT
CCTCGACAGCGTAACCATCGGTAATACCCAGGCGATGCGCGCCGCGCAAGGTACTGGCGTGAAGGTGATCAAACGGAAGG
TGTTCCTCGACGATTCGCAGAACGAAGCGGACATCCGTGTGCAATTTAATCGCGCAATTGATCTGGCGCGTCGCAACGGT
TCAACCATTGCCATTGGGCATCCTCACCCTTCAACGGTACGCGTGCTACAACAGATGGTTTATAACCTGCCGCCAGACAT
TACGCTGGTGAAAGCCAGCAGCTTGCTGAATGAACCGCAGGTTGATACTTCTACACCGCCGAAAAACGCTGTGCCTGATG
CACCGCGTAATCCGTTCCGTGGCGTGAAGCTGTGCAAACCGAAGAAACCGATAGAACCTGTTTATGCTAATCGCTTCTTT
GAAGTATTAAGCGAAAGCATCAGCCAGAGCACGCTGATCGTTTACTTCCAGCATCAGTGGCAAGGCTGGGGCAAACAGCC
CGAAGCGGCGAAGTTTAACGCTAGCGCAAATTAA

Upstream 100 bases:

>100_bases
TGCATTTGCCGCTCTGTTGGCGCTCTCCTCCCCCGTACTTGCTGGCAAACTTGCCATCGTCATTGATGATTTTGGGTATC
GCCCGCACAACGAAAACCAG

Downstream 100 bases:

>100_bases
AGGCGCTACGCGTAATGCGATGGTGCGACCGCGTTTTGTCGCGCCATTGCCATAAGCGGAAAGACCACAGTAACGCCTGG
TAACCGACCTTCACGCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINN
HMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNG
STIAIGHPHPSTVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFF
EVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN

Sequences:

>Translated_277_residues
MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINN
HMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNG
STIAIGHPHPSTVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFF
EVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN
>Mature_277_residues
MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDEIERIIRSAVNNVPYAVGINN
HMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNG
STIAIGHPHPSTVRVLQQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFF
EVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0755 [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=277, Percent_Identity=99.2779783393502, Blast_Score=571, Evalue=1e-164,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 30746; Mature: 30746

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDE
CCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
IERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMR
HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHH
AAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQMV
HHCCCCHHHHHEEHEECCCCCCCEEEEEEHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
YNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFF
HHCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHH
EVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN
HHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLAMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDE
CCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHH
IERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQAMR
HHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCHHHHH
AAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPSTVRVLQQMV
HHCCCCHHHHHEEHEECCCCCCCEEEEEEHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
YNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPVYANRFF
HHCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHH
EVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN
HHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]