Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yieG
Identifier: 30065025
GI number: 30065025
Start: 3919150
End: 3920487
Strand: Reverse
Name: yieG
Synonym: S4026
Alternate gene names: 30065025
Gene position: 3920487-3919150 (Counterclockwise)
Preceding gene: 30065031
Following gene: 30065022
Centisome position: 85.24
GC content: 52.47
Gene sequence:
>1338_bases ATGAGTCATCAACATACCACCCAGACTTCTGGTCAGAGGATGCTGGAACGTGTTTTTAAACTGCGCGAACATGGTACTAC GGCACGAACTGAAGTGATTGCCGGGTTCACCACCTTCCTGACGATGGTCTACATCGTATTTGTTAACCCACAAATTCTGG GCGTTGCTGGCATGGACACCAGTGCCGTCTTCGTAACAACCTGTCTGATTGCTGCTTTCGGTAGCATTATGATGGGATTG TTTGCAAACCTTCCGGTGGCGCTGGCTCCTGCGATGGGGCTTAACGCCTTTTTCGCTTTTGTGGTTGTCCAGGCAATGGG GCTGCCGTGGCAGATCGGTATGGGCGCAATCTTCTGGGGCGCTGTCGGACTGCTTCTTTTGACCATTTTCCGCGTTCGTT ACTGGATGATTGCTAACATTCCGGTAAGTCTGCGTGTGGGTATTACCAGCGGTATCGGCCTGTTTATCGGCATGATGGGG CTGAAAAACGCAGGTGTGATTGTCGCTAACTCGGAAACGCTGGTGAGCATCGGTAATCTGACTTCTCACAGCGTACTTCT GGGTATCCTCGGCTTTTTCATCATTGCTATTCTGGCCTCGCGCAACATTCACGCAGCGGTGCTGGTTTCTATCGTGGTGA CGACGCTGCTGGGCTGGATGCTGGGTGATGTGCACTACAATGGCATCGTTTCTGCGCCGCCGAGCGTAATGACAGTTGTG GGTCATGTAGATTTAGCCGGGTCGTTTAACCTCGGGCTGGCAGGGGTGATTTTCTCTTTCATGTTGGTCAACTTGTTTGA CTCCTCCGGTACGCTGATTGGCGTGACCGATAAAGCAGGTCTGGCGGATGAGAAGGGGAAATTCCCGCGCATGAAGCAGG CGCTGTATGTCGACAGTATCTCTTCCGTGACCGGTTCGTTTATCGGTACTTCTTCCGTTACGGCTTATATTGAGTCCTCT TCCGGCGTATCGGTTGGCGGTCGTACCGGTCTGACGGCAGTGGTTGTTGGTCTGCTGTTCCTGCTGGTTATCTTTCTGTC GCCGCTGGCGGGAATGGTGCCAGACTACGCTGCAGCTGGCGCGTTGATCTACGTTGGCGTGTTGATGACCTCAAGTCTTG CTCGCGTGAACTGGCAGGATCTTACTGAATCTGTTCCGGCGTTTATTACCGCCGTGATGATGCCGTTCAGCTTTTCGATT ACCGAAGGTATTGCGCTGGGCTTTATCTCCTACTGCGTGATGAAGATTGGTACCGGGCGTCTGCGTGACCTTAGCCCGTG CGTAATCATCGTTGCGCTGCTGTTTATCCTGAAGATTGTATTTATCGACGCTCATTAA
Upstream 100 bases:
>100_bases TATAAGTAAATCCAATAAAAAAGTCTCTCACAAACGCGCCTATTGTCGCATTTTGGTATACGATAGCGACGGATTTTCCC TCCTTGTTCGGAAATAGATA
Downstream 100 bases:
>100_bases AATCGATAGCGCATTAAAAACCCGCCATGCATGATTACTGGCGGGTTTTTTATTTAGATCTTAACTCGCTGAATAAACTC ACCAAATGCGGTCAATTGCC
Product: putative membrane / transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSHQHTTQTSGQRMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGL FANLPVALAPAMGLNAFFAFVVVQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG LKNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESS SGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPDYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSI TEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH
Sequences:
>Translated_445_residues MSHQHTTQTSGQRMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGL FANLPVALAPAMGLNAFFAFVVVQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG LKNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESS SGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPDYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSI TEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH >Mature_444_residues SHQHTTQTSGQRMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGLF ANLPVALAPAMGLNAFFAFVVVQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGL KNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVVG HVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESSS GVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPDYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSIT EGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=445, Percent_Identity=98.876404494382, Blast_Score=866, Evalue=0.0, Organism=Escherichia coli, GI87082309, Length=444, Percent_Identity=74.0990990990991, Blast_Score=660, Evalue=0.0, Organism=Escherichia coli, GI1790499, Length=438, Percent_Identity=34.703196347032, Blast_Score=262, Evalue=3e-71, Organism=Escherichia coli, GI48994909, Length=435, Percent_Identity=35.1724137931034, Blast_Score=248, Evalue=6e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 47014; Mature: 46882
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00267 TACHYKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHQHTTQTSGQRMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDT CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC SAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVVVQAMGLPWQIGMGAIFWG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGLKNAGVIVANSETLVSIGNL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCEEEECCC TSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHE GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSI ECEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH SSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPDYAAAG HHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSITEGIALGFISYCVMKIGTGR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC LRDLSPCVIIVALLFILKIVFIDAH CCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHQHTTQTSGQRMLERVFKLREHGTTARTEVIAGFTTFLTMVYIVFVNPQILGVAGMDT CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC SAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVVVQAMGLPWQIGMGAIFWG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH AVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMGLKNAGVIVANSETLVSIGNL HHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCEEEECCC TSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLGWMLGDVHYNGIVSAPPSVMTVV CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHE GHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVTDKAGLADEKGKFPRMKQALYVDSI ECEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHH SSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAVVVGLLFLLVIFLSPLAGMVPDYAAAG HHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH ALIYVGVLMTSSLARVNWQDLTESVPAFITAVMMPFSFSITEGIALGFISYCVMKIGTGR HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCC LRDLSPCVIIVALLFILKIVFIDAH CCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]