Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is uhpT
Identifier: 30064979
GI number: 30064979
Start: 3867640
End: 3869031
Strand: Reverse
Name: uhpT
Synonym: S3973
Alternate gene names: 30064979
Gene position: 3869031-3867640 (Counterclockwise)
Preceding gene: 30064980
Following gene: 30064977
Centisome position: 84.12
GC content: 52.73
Gene sequence:
>1392_bases ATGCTGGCTTTCCTAAACCAAGTTCGCAAGCCGACCCTGGACCTTCCGCTCGAAGTGCGGCGCAAAATGTGGTTCAAACC GTTCATGCAATCCTACCTGGTGGTCTTTATCGGCTACCTGACGATGTACCTGATTCGCAAGAACTTTAACATCGCGCAGA ACGATATGATTTCGACCTACGGGTTGAGCATGACGCAGCTGGGGATGATCGGCCTGGGTTTCTCCATCACTTATGGCGTG GGTAAAACGTTGGTTTCATACTACGCCGACGGCAAAAACACCAAACAATTCCTGCCGTTCATGCTTATCCTCTCTGCCAT TTGTATGCTGGGCTTCAGTGCCAGTATGGGCAGCGGCTCGGTTAGCCTGTTCCTGATGATTGCCTTCTACGCCTTAAGCG GCTTTTTCCAGAGTACCGGCGGTTCGTGCAGTTACTCCACCATCACCAAATGGACGCCGCGTCGTAAACGCGGGACATTC CTCGGTTTCTGGAATATTTCTCACAACCTTGGCGGTGCAGGCGCAGCAGGTGTGGCGCTGTTCGGGGCAAATTACCTGTT CGATGGCCATGTCATCGGCATGTTTATCTTCCCGTCGATTATCGCGCTGATTGTCGGTTTTATCGGCCTGCGTTACGGCA GCGACTCCCCGGAATCTTATGGCCTCGGCAAAGCTGAAGAACTGTTCGGCGAGGAGATCAGCGAAGAGGACAAAGAGACA GAATCTACCGATATGACCAAGTGGCAGATCTTTGTTGAGTATGTGCTGAAAAACAAAGTGATCTGGCTGCTGTGCTTCGC CAACATTTTCCTCTATGTGGTACGTATTGGTATCGACCAGTGGTCAACCGTATACGCGTTCCAGGAACTGAAACTCTCTA AAGCGGTGGCGATTCAGGGCTTTACGCTGTTTGAAGCTGGTGCGCTGGTCGGTACGCTGCTGTGGGGCTGGCTCTCTGAC CTGGCGAACGGTCGCCGTGGCCTGGTGGCCTGCATCGCGCTGGCGCTGATTATCGCCACGCTCGGTGTGTATCAACATGC CAGTAACGAATATATCTATCTGGCTTCTCTCTTTGCGTTGGGTTTCCTGGTCTTTGGCCCGCAATTGTTGATTGGTGTGG CTGCTGTTGGCTTTGTACCTAAAAAAGCGATTGGCGCTGCCGATGGTATTAAAGGCACCTTTGCTTACCTGATTGGTGAC AGCTTTGCCAAGTTAGGTCTGGGAATGATTGCCGATGGGACGCCGGTATTCGGCCTTACCGGCTGGGCAGGCACCTTCGC CGCGCTGGATATCGCCGCGATTGGTTGTATCTGCCTGATGGCGATAGTGGCGGTAATGGAAGAACGCAAAATCCGCCGCG AGAAAAAAATTCAGCAGTTGACAGTGGCATAA
Upstream 100 bases:
>100_bases AGAAATTTTCCAGGTTTTTCTTGGACGCTATCTCAGGCCTGATTTGCTGCTGATTTTTACAATGCATGCCTCACGCAGGT ATTCATTTCAGGAGTAACCC
Downstream 100 bases:
>100_bases ACGTAACTGGTGACTTTTGCCCGGCATGACGCCGGGCTTTTTTTATTATTCCGTGACTTCCAGCGTAGTGAAGGCAAACT TCTCGCCATCAAATAGCCCC
Product: sugar phosphate antiporter
Products: Proton [Cytoplasm]; glucose-6-phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGV GKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKET ESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRIGIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSD LANGRRGLVACIALALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGD SFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERKIRREKKIQQLTVA
Sequences:
>Translated_463_residues MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGV GKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKET ESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRIGIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSD LANGRRGLVACIALALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGD SFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERKIRREKKIQQLTVA >Mature_463_residues MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGV GKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKET ESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRIGIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSD LANGRRGLVACIALALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGD SFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERKIRREKKIQQLTVA
Specific function: Transport protein for sugar phosphate uptake
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family
Homologues:
Organism=Homo sapiens, GI256219598, Length=436, Percent_Identity=23.6238532110092, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI4503847, Length=436, Percent_Identity=23.6238532110092, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI256219483, Length=436, Percent_Identity=23.6238532110092, Blast_Score=70, Evalue=5e-12, Organism=Escherichia coli, GI2367259, Length=463, Percent_Identity=100, Blast_Score=933, Evalue=0.0, Organism=Escherichia coli, GI1788573, Length=457, Percent_Identity=31.7286652078775, Blast_Score=218, Evalue=5e-58, Organism=Escherichia coli, GI87082310, Length=463, Percent_Identity=33.0453563714903, Blast_Score=192, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17542316, Length=483, Percent_Identity=22.5672877846791, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24656866, Length=496, Percent_Identity=21.3709677419355, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI45550478, Length=496, Percent_Identity=21.3709677419355, Blast_Score=69, Evalue=6e-12, Organism=Drosophila melanogaster, GI24656861, Length=493, Percent_Identity=21.501014198783, Blast_Score=68, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UHPT_ECO57 (P0AGC1)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: C91204 - RefSeq: NP_290301.1 - RefSeq: NP_312630.1 - ProteinModelPortal: P0AGC1 - EnsemblBacteria: EBESCT00000028520 - EnsemblBacteria: EBESCT00000056367 - GeneID: 915432 - GeneID: 960810 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z5156 - KEGG: ecs:ECs4603 - GeneTree: EBGT00050000008831 - HOGENOM: HBG559184 - OMA: YSTITRW - ProtClustDB: PRK09556 - BioCyc: ECOL83334:ECS4603-MONOMER - InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 - TIGRFAMs: TIGR00881
Pfam domain/function: PF07690 MFS_1; SSF103473 MFS_gen_substrate_transporter
EC number: NA
Molecular weight: Translated: 50607; Mature: 50607
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00942 GLPT; PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x14e26d90)-; HASH(0x161241b0)-; HASH(0x16136f24)-; HASH(0x15e5fe34)-; HASH(0x16156854)-; HASH(0x15da2040)-; HASH(0x15a395f0)-; HASH(0x161591ec)-; HASH(0x14f54504)-; HASH(0x124f21e8)-; HASH(0x16153b88)-; HASH(0x1614a338)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTY CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHH GLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGS CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH VSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTFLGFWNISHNLGGAGAAGVAL HHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH FGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKET HCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC ESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRIGIDQWSTVYAFQELKLSKAVAIQG CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC FTLFEAGALVGTLLWGWLSDLANGRRGLVACIALALIIATLGVYQHASNEYIYLASLFAL CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH GFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGDSFAKLGLGMIADGTPVFGLT HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEECC GWAGTFAALDIAAIGCICLMAIVAVMEERKIRREKKIQQLTVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYLIRKNFNIAQNDMISTY CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCHHHHH GLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFMLILSAICMLGFSASMGSGS CCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCH VSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTFLGFWNISHNLGGAGAAGVAL HHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH FGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPESYGLGKAEELFGEEISEEDKET HCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC ESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRIGIDQWSTVYAFQELKLSKAVAIQG CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC FTLFEAGALVGTLLWGWLSDLANGRRGLVACIALALIIATLGVYQHASNEYIYLASLFAL CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH GFLVFGPQLLIGVAAVGFVPKKAIGAADGIKGTFAYLIGDSFAKLGLGMIADGTPVFGLT HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCEECC GWAGTFAALDIAAIGCICLMAIVAVMEERKIRREKKIQQLTVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; glucose-6-phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + glucose-6-phosphate [Periplasm] = Proton [Cytoplasm] + glucose-6-phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796