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The map label for this gene is yicO

Identifier: 30064977

GI number: 30064977

Start: 3864319

End: 3865731

Strand: Reverse

Name: yicO

Synonym: S3971

Alternate gene names: 30064977

Gene position: 3865731-3864319 (Counterclockwise)

Preceding gene: 30064979

Following gene: 30064976

Centisome position: 84.05

GC content: 47.2

Gene sequence:

>1413_bases
GTGATAATTATCACTGAACCGTTGTTGTCATTTGTTTTACAAAAGCAAGGGATTAAATCTCCTCCAATGGACAAAAAAAT
GAATAATGACAATACCGATTACGTGAGTAATGAATCAGGGACGCTTTCGCGATTATTTAAACTACCTCAGCATGGGACCA
CCGTCCGCACAGAATTGATTGCGGGGATGACCACTTTTTTAACCATGGTGTACATTGTTTTTGTGAACCCGCAAATCCTC
GGCGCGGCACAAATGGACCCGAAAGTGGTGTTTGTTACCACCTGTTTGATTGCCGGTATCGGCAGTATTGCGATGGGGAT
ATTTGCTAACTTACCCGTGGCGCTGGCTCCGGCAATGGGGCTGAACGCCTTCTTTGCGTTCGTGGTCGTGGGGGCGATGG
GGATCTCCTGGCAGACCGGGATGGGCGCGATATTCTGGGGCGCAATTGGGCTATTTTTGCTCACGCTGTTTCGTATCCGG
TACTGGATGATCTCCAACATTCCATTAAGTTTACGTATTGGTATCACCAGTGGAATCGGATTATTTATTGCCTTAATGGG
ATTAAAAAACACTGGTGTTATTGTCGCCAATAAAGACACGCTGGTGATGATTGGCGATTTAAGTTCTCACGGCGTGTTGT
TAGGTATTTTAGGGTTTTTTATTATAACCGTGTTGTCATCACGTCATTTTCATGCCGCGGTGCTGGTTTCTATTGTGGTG
ACGTCTTGCTGTGGATTATTTTTCGGTGATGTTCATTTTAGCGGCGTCTATTCCATTCCGCCTGATATTAGCGGCGTCAT
TGGTGAAGTAGATTTGAGCGGCGCGTTAACACTTGAACTCGCCGGTATCATTTTCTCCTTTATGCTGATCAACCTATTTG
ATTCATCAGGAACATTAATTGGTGTAACTGATAAAGCGGGCTTAATAGATAGCAACGGTAAATTCCCCAATATGAATAAG
GCGCTGTATGTTGATAGCGTCAGTTCGGTGGCAGGCGCATTTATCGGTACCTCGTCTGTTACTGCCTATATTGAAAGTAC
TTCTGGTGTGGCAGTCGGTGGTCGCACGGGGCTAACGGCTGTCGTGGTCGGCGTTATGTTCCTGTTAGTTATGTTCTTCT
CACCGCTGGTGGCGATGGTTCCTCCTTACGCAACCGCTGGAGCGTTAATCTTTGTTGGCGTGCTGATGACTTCGAGCCTG
GCGCGCGTTAACTGGGATGATTTTACCGAATCGGTGCCTGCGTTTATTACCACGGTGATGATGCCCTTTACTTTCTCGAT
CACCGAAGGGATTGCACTCGGCTTTATGTCGTACTGCATCATGAAAGTGTGCACCGGGCGCTGGCGCGATCTGAACCTGT
GTGTGGTGGTGGTCGCAGCTCTGTTCGCATTGAAGATTATTCTGGTGGATTAG

Upstream 100 bases:

>100_bases
TCATATTTTTCTCATTTTGATTTTATCAATTTGATTATTATTTATCATAAAGAAACGTCGCGAGATTATTAAAGAATATC
TATTAATGTGCAATTGAAAT

Downstream 100 bases:

>100_bases
TAACTGGCGAGGGTTTCCAGATATCATGAGTTCTGATTACGCAGGAGAACTCATGATCTGGATAATGCTCGCCACGCTGG
CGGTAGTGTTTGTGGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 470

Protein sequence:

>470_residues
MIIITEPLLSFVLQKQGIKSPPMDKKMNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQIL
GAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAIGLFLLTLFRIR
YWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVV
TSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDSNGKFPNMNK
ALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSL
ARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD

Sequences:

>Translated_470_residues
MIIITEPLLSFVLQKQGIKSPPMDKKMNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQIL
GAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAIGLFLLTLFRIR
YWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVV
TSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDSNGKFPNMNK
ALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSL
ARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD
>Mature_470_residues
MIIITEPLLSFVLQKQGIKSPPMDKKMNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELIAGMTTFLTMVYIVFVNPQIL
GAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFVVVGAMGISWQTGMGAIFWGAIGLFLLTLFRIR
YWMISNIPLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVV
TSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDSNGKFPNMNK
ALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSL
ARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082309, Length=444, Percent_Identity=99.3243243243243, Blast_Score=873, Evalue=0.0,
Organism=Escherichia coli, GI1790150, Length=444, Percent_Identity=74.5495495495496, Blast_Score=647, Evalue=0.0,
Organism=Escherichia coli, GI1790499, Length=431, Percent_Identity=40.3712296983759, Blast_Score=301, Evalue=7e-83,
Organism=Escherichia coli, GI48994909, Length=447, Percent_Identity=36.4653243847875, Blast_Score=265, Evalue=7e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 49934; Mature: 49934

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIITEPLLSFVLQKQGIKSPPMDKKMNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELI
CEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
AGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMG
HHHHHHHHHHHHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LNAFFAFVVVGAMGISWQTGMGAIFWGAIGLFLLTLFRIRYWMISNIPLSLRIGITSGIG
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
LFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVV
HHHHHHCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLI
HHHHHHHHCCHHCCCEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
GVTDKAGLIDSNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTA
EECCCCCEECCCCCCCCCCCEEEEECHHHHHHHHHCCCCEEEEEECCCCEEECCCCCHHH
VVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVM
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIIITEPLLSFVLQKQGIKSPPMDKKMNNDNTDYVSNESGTLSRLFKLPQHGTTVRTELI
CEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHH
AGMTTFLTMVYIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMG
HHHHHHHHHHHHHHCCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LNAFFAFVVVGAMGISWQTGMGAIFWGAIGLFLLTLFRIRYWMISNIPLSLRIGITSGIG
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
LFIALMGLKNTGVIVANKDTLVMIGDLSSHGVLLGILGFFIITVLSSRHFHAAVLVSIVV
HHHHHHCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
TSCCGLFFGDVHFSGVYSIPPDISGVIGEVDLSGALTLELAGIIFSFMLINLFDSSGTLI
HHHHHHHHCCHHCCCEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
GVTDKAGLIDSNGKFPNMNKALYVDSVSSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTA
EECCCCCEECCCCCCCCCCCEEEEECHHHHHHHHHCCCCEEEEEECCCCEEECCCCCHHH
VVVGVMFLLVMFFSPLVAMVPPYATAGALIFVGVLMTSSLARVNWDDFTESVPAFITTVM
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MPFTFSITEGIALGFMSYCIMKVCTGRWRDLNLCVVVVAALFALKIILVD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]