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The map label for this gene is rhoL

Identifier: 30064923

GI number: 30064923

Start: 3798397

End: 3798498

Strand: Reverse

Name: rhoL

Synonym: S3904

Alternate gene names: 30064923

Gene position: 3798498-3798397 (Counterclockwise)

Preceding gene: 30064924

Following gene: 30064922

Centisome position: 82.59

GC content: 49.02

Gene sequence:

>102_bases
ATGCGAAGTGAACAGATTTCTGGCTCGTCACTCAATCCGTCTTGTCGTTTCAGTTCTGCGTACTCTCCTGTGACCAGGCA
GCGAAAAGACATGAGTCGATGA

Upstream 100 bases:

>100_bases
CGCCCGGCGTGAGTCATGCTAACTTAGTGTTGACTTCGTATTAAACATACCTTATTAAGTTTGAATCTTGTAATTTCCAA
CGCTTCCCGTTTTATCTTAA

Downstream 100 bases:

>100_bases
CCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACAC
CACTATGAATCTTACCGAAT

Product: putative rho operon leader peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 33; Mature: 33

Protein sequence:

>33_residues
MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR

Sequences:

>Translated_33_residues
MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR
>Mature_33_residues
MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LPRH_ECO57 (Q8XAT0)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C91218
- PIR:   D86064
- RefSeq:   NP_290412.1
- RefSeq:   NP_312742.1
- ProteinModelPortal:   Q8XAT0
- EnsemblBacteria:   EBESCT00000027076
- EnsemblBacteria:   EBESCT00000056867
- GeneID:   915252
- GeneID:   960388
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z5292
- KEGG:   ecs:ECs4715
- GeneTree:   EBGT00050000009162
- HOGENOM:   HBG086563
- ProtClustDB:   PRK09979
- BioCyc:   ECOL83334:ECS4715-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3750; Mature: 3750

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796