Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is aslB
Identifier: 30064908
GI number: 30064908
Start: 3780536
End: 3781771
Strand: Reverse
Name: aslB
Synonym: S3885
Alternate gene names: 30064908
Gene position: 3781771-3780536 (Counterclockwise)
Preceding gene: 30064909
Following gene: 30064901
Centisome position: 82.22
GC content: 51.21
Gene sequence:
>1236_bases ATGCTGCAACAGGTTCCAACGCGTGCTTTTCATGTGATAGCGAAACCGAGCGGTTCCGATTGTAATCTGAACTGTGACTA CTGTTTTTATCTCGAAAAACAATCCCTTTACCGCGAAAAGCCAGTCACGCATATGGACGATGACACGCTGGAAGCGTATA TCCGTCACTATATCGCCGCCAGCGAACTGCAAAACGAAGTGGCTTTTACCTGGCAGGGCGGCGAACCAACGCTACTCGGG CTGGAGTTTTACCGCCGTGCCGTGGCGCTACAGGCGAAATATGGTGCTGGCAGGAAGATAAGTAACAGTTTCCAGACTAA CGGCGTGCTGCTCGATGACGAATGGTGTGCATTTCTGGCAGAAAATAATTTTCTTGTTGGGTTATCGCTGGATGGTCCGG CTGAGATCCACAATCAATATCGCGTGACCAAAGGCGGCAGACCCACGCATAAACTGGTGATGCGTGCCCTGACGCTCCTG CAAAAACATCATGTCGACTATAACGTGCTGGTCTGCGTCAACCGCACCAGCGCGCAGCAACCGTTACAGGTTTATGATTT TTTGTGCGATGCGGGAGTCGAATTCATCCAGTTTATTCCGGTGGTCGAGCGCCTGGCTGATGAAACAGCTGTCCGCGATG GACTGAAACTACATGCGCCTGGTGATATTCAGGGGGAACTGACGGAATGGTCTGTGCGCCCCGATGAATTTGGTGAATTT CTGGTGGCGATTTTTGACCACTGGATCAAACGCGACGTCGGCAAGATTTTCGTGATGAATATCGAATGGGCGTTTGCCAA TTTTGTCGGTGCGCCGGGTGCGGTTTGCCATCATCAGCCAACCTGTGGGCGCTCGGTGATTGTTGAGCACAACGGCGACG TTTACGCCTGCGATCACTATGTTTATCCGCAATATCGGCTGGGGAATATGCATCAGCAAACAATTGCAGAAATGATCGAT TCCCCGCAACAGCAGGTGTTTGGTGAAGATAAATTTAAGCAATTACCGGCGCAGTGTCGCAGTTGTAACGTGTTAAAAGC ATGTTGGGGAGGCTGCCCGAAACACCGCTTCATGCTCGATGCCAGCGGCAAACCGGGGCTGAATTATTTGTGTGCCGGGT ATCAGCGTTATTTCCGCCATCTACCGCCATATCTTAAAGCAATGGCTGATTTGCTGGCGCACGGTCGCCCGGCCAGTGAC ATTATGCAGGCACATTTGATGGTGGTGAATAAGTAA
Upstream 100 bases:
>100_bases GTCACCCTCCCTTCGCAATAAACGCCCGTAATAACTCATTGCCCCACGGTATGATTTCGCCCTTAACGTATTGAAGGATG ACTTCAGGCAAGGAGCGACC
Downstream 100 bases:
>100_bases AAAAGCGGCCATTTGGAAGCCGCCTGCGGTTGATTGCCGGATGCGGCGTAAACGCCTTATCCGGCCTACATGATCGTGCA AATTCAATAAATTGCAGCGT
Product: putative arylsulfatase regulator
Products: NA
Alternate protein names: AnSME homolog [H]
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MLQQVPTRAFHVIAKPSGSDCNLNCDYCFYLEKQSLYREKPVTHMDDDTLEAYIRHYIAASELQNEVAFTWQGGEPTLLG LEFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLAENNFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLL QKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETAVRDGLKLHAPGDIQGELTEWSVRPDEFGEF LVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMID SPQQQVFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASD IMQAHLMVVNK
Sequences:
>Translated_411_residues MLQQVPTRAFHVIAKPSGSDCNLNCDYCFYLEKQSLYREKPVTHMDDDTLEAYIRHYIAASELQNEVAFTWQGGEPTLLG LEFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLAENNFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLL QKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETAVRDGLKLHAPGDIQGELTEWSVRPDEFGEF LVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMID SPQQQVFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASD IMQAHLMVVNK >Mature_411_residues MLQQVPTRAFHVIAKPSGSDCNLNCDYCFYLEKQSLYREKPVTHMDDDTLEAYIRHYIAASELQNEVAFTWQGGEPTLLG LEFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLAENNFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLL QKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETAVRDGLKLHAPGDIQGELTEWSVRPDEFGEF LVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMID SPQQQVFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASD IMQAHLMVVNK
Specific function: Potential Positive Factor For The Regulation Of Arylsulfatase. [C]
COG id: COG0641
COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI48994973, Length=411, Percent_Identity=96.5936739659367, Blast_Score=840, Evalue=0.0, Organism=Escherichia coli, GI87081923, Length=392, Percent_Identity=40.8163265306122, Blast_Score=327, Evalue=6e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 46560; Mature: 46560
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQQVPTRAFHVIAKPSGSDCNLNCDYCFYLEKQSLYREKPVTHMDDDTLEAYIRHYIAA CCCCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHH SELQNEVAFTWQGGEPTLLGLEFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLA HHHCCCEEEEEECCCCEEEHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEECCHHHHEEE ENNFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQ CCCEEEEEECCCCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC PLQVYDFLCDAGVEFIQFIPVVERLADETAVRDGLKLHAPGDIQGELTEWSVRPDEFGEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEECCCCHHHHHHH LVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHY HHHHHHHHHHHCCCEEEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEECE VYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLD ECCCHHCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEE ASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASDIMQAHLMVVNK CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHEECC >Mature Secondary Structure MLQQVPTRAFHVIAKPSGSDCNLNCDYCFYLEKQSLYREKPVTHMDDDTLEAYIRHYIAA CCCCCCCCEEEEEECCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHHHHHHHH SELQNEVAFTWQGGEPTLLGLEFYRRAVALQAKYGAGRKISNSFQTNGVLLDDEWCAFLA HHHCCCEEEEEECCCCEEEHHHHHHHHHHHEECCCCCCCCCCCCCCCCEEECCHHHHEEE ENNFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQ CCCEEEEEECCCCHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCC PLQVYDFLCDAGVEFIQFIPVVERLADETAVRDGLKLHAPGDIQGELTEWSVRPDEFGEF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCEECCCCHHHHHHH LVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVCHHQPTCGRSVIVEHNGDVYACDHY HHHHHHHHHHHCCCEEEEEEEEHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCEEEEECE VYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQLPAQCRSCNVLKACWGGCPKHRFMLD ECCCHHCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEE ASGKPGLNYLCAGYQRYFRHLPPYLKAMADLLAHGRPASDIMQAHLMVVNK CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Oxidoreductases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503; 11222759 [H]