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The map label for this gene is yigA

Identifier: 30064894

GI number: 30064894

Start: 3765315

End: 3766022

Strand: Reverse

Name: yigA

Synonym: S3868

Alternate gene names: 30064894

Gene position: 3766022-3765315 (Counterclockwise)

Preceding gene: 161486405

Following gene: 30064893

Centisome position: 81.88

GC content: 55.93

Gene sequence:

>708_bases
ATGAAGCAACCAGGGGAAGAACTGCAGGAAACACTCACGGAGCTTGATGACCGGGCGGTTGTCGATTATCTGATTAAAAA
TCCTGAGTTTTTTATCCGCAATGCGCGCGCAGTAGAAGCGATACGTGTGCCGCATCCGGTACGCGGCACCGTTTCGTTGG
TCGAGTGGCACATGGCCCGCGCACGTAATCACATTCATGTTCTGGAAGAGAACATGGCGTTGTTGATGGAGCAGGCTATC
GCCAACGAAGGGCTGTTTTATCGCCTACTCTACCTGCAGCGCAGTCTCACCGCCGCCAGCAGTCTCGACGATATGCTGAT
GCGCTTTCACCGCTGGGCGCGCGATCTCGGCCTAGCTGGTGCGAGTCTGCGCCTGTTTCCAGATCGCTGGCGCTTAGGTG
CGCCGTCGAACCACACTCATCTGGCATTAAGCCGTCAGTCTTTCGAACCGCTGCGTATTCAGCGTTTGGGGCAGGAACAG
CACTATCTTGGGCCGCTTAACGGACCGGAGCTGCTGGTGGTGCTACCGGAAGCGAAAGCGGTGGGATCGGTGGCGATGTC
GATGCTGGGAAGCGATGCTGATTTGGGTGTTGTGCTGTTTACCAGTCGCGATGCCAGTCACTATCAACAAGGGCAGGGAA
CGCAGTTACTTCATGAAATTGCGCTGATGTTGCCGGAGCTTCTGGAGCGTTGGATTGAACGCGTATGA

Upstream 100 bases:

>100_bases
AACTCCCCGGCGGTCGTCTTGATATCGCCTGGAAAGGTCCGGGTCACCCGTTATATATGACTGGCCCGGCGGTACATGTC
TACGATGGATTTATTCATCT

Downstream 100 bases:

>100_bases
CCGATTTACACACCGATGTAGAACGCTACCTACGTTATCTGAGCGTGGAGCGTCAGCTTAGCCCGATAACCCTACTTAAC
TACCAGCGTCAGCTTGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAI
ANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ
HYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV

Sequences:

>Translated_235_residues
MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAI
ANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ
HYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV
>Mature_235_residues
MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAI
ANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ
HYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV

Specific function: Unknown

COG id: COG3159

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790243, Length=235, Percent_Identity=100, Blast_Score=475, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIGA_ECOLI (P23305)

Other databases:

- EMBL:   M38257
- EMBL:   M87049
- EMBL:   U00096
- EMBL:   AP009048
- PIR:   B37841
- RefSeq:   AP_003989.1
- RefSeq:   NP_418255.1
- ProteinModelPortal:   P23305
- SMR:   P23305
- DIP:   DIP-12478N
- STRING:   P23305
- EnsemblBacteria:   EBESCT00000002818
- EnsemblBacteria:   EBESCT00000015028
- GeneID:   948359
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW3783
- KEGG:   eco:b3810
- EchoBASE:   EB1186
- EcoGene:   EG11201
- eggNOG:   COG3159
- GeneTree:   EBGT00050000009868
- HOGENOM:   HBG416151
- OMA:   DNDRLFD
- ProtClustDB:   PRK10963
- BioCyc:   EcoCyc:EG11201-MONOMER
- Genevestigator:   P23305
- InterPro:   IPR007435

Pfam domain/function: PF04340 DUF484

EC number: NA

Molecular weight: Translated: 26729; Mature: 26729

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR
CCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHCCHHHHHEECCCCCCHHHHHHHHHHHH
ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG
HCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA
CEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCHHCCCCCCCCCEEEEEECCCHH
VGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV
HHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVPHPVRGTVSLVEWHMAR
CCCCHHHHHHHHHHHCHHHHHHHHHCCCHHHHHCCHHHHHEECCCCCCHHHHHHHHHHHH
ARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSLDDMLMRFHRWARDLGLAG
HCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQHYLGPLNGPELLVVLPEAKA
CEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCHHCCCCCCCCCEEEEEECCCHH
VGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLHEIALMLPELLERWIERV
HHHHHHHHHCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503