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The map label for this gene is yiiE

Identifier: 30064818

GI number: 30064818

Start: 3678300

End: 3678545

Strand: Reverse

Name: yiiE

Synonym: S3783

Alternate gene names: 30064818

Gene position: 3678545-3678300 (Counterclockwise)

Preceding gene: 30064819

Following gene: 30064817

Centisome position: 79.98

GC content: 45.93

Gene sequence:

>246_bases
ATGAGTAATATATGTAAGGTGGTGGTAATGGCGATGAATACGGTTTTTCTTCATTTATCAGAAGAGGCAATTAAACGGCT
GAACAAGCTTCGGGGCTGGCGTAAGGTTTCACGATCTGCAATTTTACGCGAAGCGGTTGAGCAATATCTGGAGCGGCAGC
AATTTCCGGTGCGTAAAGCAAAGGGAGGCAGGCAAAAGGGGGAGGTAGTTGGTGTTGATGATCAGTGTAAGGAGCATAAG
GAATGA

Upstream 100 bases:

>100_bases
CTCTTATTATTTCTGGAAAACGCCTCGCAAAAACAAAATGACATGCAAAAATCCGCATTTTTTTAAATGCTTTTCCGGCG
TAATTTTCGCACATACATTA

Downstream 100 bases:

>100_bases
AAAAAATTTTTCATTCTTGAATATAAAAAACAGATGCCCTTATTCTGGTATTAATACAAGGCTGTTTTACTTGAACTTAT
AATAACTGCAACTGTTACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 80

Protein sequence:

>81_residues
MSNICKVVVMAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEVVGVDDQCKEHK
E

Sequences:

>Translated_81_residues
MSNICKVVVMAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEVVGVDDQCKEHK
E
>Mature_80_residues
SNICKVVVMAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQKGEVVGVDDQCKEHKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiiE family [H]

Homologues:

Organism=Escherichia coli, GI145693207, Length=70, Percent_Identity=100, Blast_Score=144, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002145 [H]

Pfam domain/function: PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 9382; Mature: 9251

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNICKVVVMAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
KGGRQKGEVVGVDDQCKEHKE
CCCCCCCCEECCCHHHHCCCC
>Mature Secondary Structure 
SNICKVVVMAMNTVFLHLSEEAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
KGGRQKGEVVGVDDQCKEHKE
CCCCCCCCEECCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]