| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is frwD
Identifier: 30064760
GI number: 30064760
Start: 3610672
End: 3611013
Strand: Reverse
Name: frwD
Synonym: S3716
Alternate gene names: 30064760
Gene position: 3611013-3610672 (Counterclockwise)
Preceding gene: 30064761
Following gene: 30064755
Centisome position: 78.51
GC content: 56.43
Gene sequence:
>342_bases ATGGCATACCTGGTGGCAGTAACCGCCTGCGTAAGCGGCGTGGCGCATACTTATATGGCGGCGGAACGGCTGGAAAAGTT GTGCCAGTTAGAGAAGTGGGGCGTCAGCATTGAAACTCAGGGCGCGCTGGGAACGGAGAATCGTTTAGCGGACGAGGATA TCCGTCGGGCGGATGTTGCTCTGTTGATTACGGATATCGAGCTTGCCGGTGCCGAGCGATTTGAACATTGCCGCTATGTG CAATGCAGCATCTACGCATTCCTGCGTGAGCCGCAGCGGGTAATGAGCGCGGTGCGCAAAGTGCTTTCTGCGCCGCAGCA AACCCATCTTATTCTGGAGTAG
Upstream 100 bases:
>100_bases TGGTCGATGAAAGAGGTGCCTGCGCCGTCGTCAGCCGATGTGACAACGATGCGCGAAATGGCAGAACGGGCCGGATTTCA GGTTACCGTGGGAGGTTAAA
Downstream 100 bases:
>100_bases TCGGTTTTTCTGTCAGTTGGCTGTGGTACTGCCGGCGATATTCCGACGGCGAGTGTTCGGTGTTTTTACGAAACAGACGG CAGAAGTAGTTGCTGTCGAC
Product: putative fructose-like phosphotransferase EIIB subunit 3
Products: NA
Alternate protein names: PTS system fructose-like EIIB component 3 [H]
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALGTENRLADEDIRRADVALLITDIELAGAERFEHCRYV QCSIYAFLREPQRVMSAVRKVLSAPQQTHLILE
Sequences:
>Translated_113_residues MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALGTENRLADEDIRRADVALLITDIELAGAERFEHCRYV QCSIYAFLREPQRVMSAVRKVLSAPQQTHLILE >Mature_112_residues AYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALGTENRLADEDIRRADVALLITDIELAGAERFEHCRYVQ CSIYAFLREPQRVMSAVRKVLSAPQQTHLILE
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]
COG id: COG1445
COG function: function code G; Phosphotransferase system fructose-specific component IIB
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790390, Length=113, Percent_Identity=99.1150442477876, Blast_Score=228, Evalue=5e-62, Organism=Escherichia coli, GI1790387, Length=98, Percent_Identity=43.8775510204082, Blast_Score=87, Evalue=2e-19, Organism=Escherichia coli, GI87082348, Length=70, Percent_Identity=45.7142857142857, Blast_Score=66, Evalue=5e-13, Organism=Escherichia coli, GI1788492, Length=65, Percent_Identity=44.6153846153846, Blast_Score=64, Evalue=2e-12, Organism=Escherichia coli, GI1788730, Length=104, Percent_Identity=31.7307692307692, Blast_Score=60, Evalue=4e-11, Organism=Escherichia coli, GI1786951, Length=71, Percent_Identity=42.2535211267606, Blast_Score=59, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003353 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 12652; Mature: 12521
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS51099 PTS_EIIB_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALGTENRLADEDIRRADVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHH LLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVLSAPQQTHLILE HEEEHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHCEECC >Mature Secondary Structure AYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALGTENRLADEDIRRADVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHH LLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVLSAPQQTHLILE HEEEHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7773398 [H]