| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yjaG
Identifier: 30064719
GI number: 30064719
Start: 3554144
End: 3554734
Strand: Reverse
Name: yjaG
Synonym: S3664
Alternate gene names: 30064719
Gene position: 3554734-3554144 (Counterclockwise)
Preceding gene: 30064720
Following gene: 30064718
Centisome position: 77.29
GC content: 48.39
Gene sequence:
>591_bases ATGTTACAAAACCCAATTCATCTGCGTCTGGAGCGCCTGGAAAGCTGGCAGCATGTCACTTTCATGGCTTGCTTATGCGA ACGCATGTACCCCAATTACGCCATGTTCTGCCAGCAAACCGGTTTTGGTGATGGGCAAATTTACCGTCGTATTCTCGATC TCATCTGGGAAACGCTGACCGTTAAAGACGCAAAAGTAAATTTCGACAGCCAACTGGAGAAATTTGAAGAAGCGATTCCT TCAGCCGACGATTTCGATCTGTACGGCGTTTATCCGGCAATCGATGCCTGCGTGGCGTTAAGTGAACTGGTCCATTCGCG TTTGAGTGGTGAAACGCTCGAACACGCGGTGGAAGTGAGTAAGACCTCCATCACGACCGTTGCGATGCTGGAAATGACTC AGGCTGGTCGCGAAATGGGCGATGAAGAGCTTAAAGAAAACCCAGCTGTAGAGCAAGAATGGGACATTCAGTGGGAAATA TTCCGACTTTTAGCTGAGTGCGAAGAACGCGATATCGAGCTGATAAAAGGCCTTAGGGCAGACCTGCGTGAGTCGGGTGA GAGCAATATTGGTATAATTTTTCAGCAATAA
Upstream 100 bases:
>100_bases GGACGCGGTGGCCTCGGAACGTCCGGCGTTCGTGCGCTATACAGCAAATCAGCCCTAATTCAGGTAAACTGCGGATAATT TCCGTATTTGAGAACTCAAC
Downstream 100 bases:
>100_bases GACCAGAAAACGTGATTTAACGCCTGATTTGTCGTACCTGGAGTCTTCCCTTTCGCCCCCCGTCTGGTCTACATTTGGGG GGCGAAAAAAAGTGGCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIP SADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMGDEELKENPAVEQEWDIQWEI FRLLAECEERDIELIKGLRADLRESGESNIGIIFQQ
Sequences:
>Translated_196_residues MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIP SADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMGDEELKENPAVEQEWDIQWEI FRLLAECEERDIELIKGLRADLRESGESNIGIIFQQ >Mature_196_residues MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIP SADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVSKTSITTVAMLEMTQAGREMGDEELKENPAVEQEWDIQWEI FRLLAECEERDIELIKGLRADLRESGESNIGIIFQQ
Specific function: Unknown
COG id: COG3068
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae HI_0431 [H]
Homologues:
Organism=Escherichia coli, GI1790432, Length=196, Percent_Identity=98.9795918367347, Blast_Score=404, Evalue=1e-114,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007338 [H]
Pfam domain/function: PF04222 DUF416 [H]
EC number: NA
Molecular weight: Translated: 22599; Mature: 22599
Theoretical pI: Translated: 4.16; Mature: 4.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH VKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVS HCCCCCCHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KTSITTVAMLEMTQAGREMGDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRA HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DLRESGESNIGIIFQQ HHHHCCCCCEEEEEEC >Mature Secondary Structure MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGDGQIYRRILDLIWETLT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH VKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVALSELVHSRLSGETLEHAVEVS HCCCCCCHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KTSITTVAMLEMTQAGREMGDEELKENPAVEQEWDIQWEIFRLLAECEERDIELIKGLRA HHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DLRESGESNIGIIFQQ HHHHCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503 [H]