| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is glmM
Identifier: 30064514
GI number: 30064514
Start: 3306033
End: 3307370
Strand: Reverse
Name: glmM
Synonym: S3434
Alternate gene names: 30064514
Gene position: 3307370-3306033 (Counterclockwise)
Preceding gene: 161486427
Following gene: 30064513
Centisome position: 71.91
GC content: 54.48
Gene sequence:
>1338_bases ATGAGTAATCGTAAATATTTCGGTACCGATGGGATTCGTGGTCGTGTAGGGGATGCGCCGATCACACCTGATTTTGTGCT TAAGCTGGGTTGGGCCGCGGGTAAAGTGCTGGCGCGCCACGGCTCCCGTAAGATTATTATTGGTAAAGACACGCGTATTT CTGGCTATATGCTGGAGTCAGCACTGGAAGCGGGTCTGGCGGCAGCGGGCCTTTCCGCACTCTTCACTGGCCCGATGCCA ACACCGGCCGTGGCTTATCTGACGCGTACCTTCCGCGCAGAGGCCGGAATTGTGATATCTGCATCGCATAACCCGTTCTA CGATAATGGGATTAAATTCTTCTCTATCGACGGCACTAAACTGCCGGATGCGGTAGAAGAGGCCATCGAAGCGGAAATGG AAAAGGAGATCAGCTGCGTTGATTCGGCTGAACTGGGTAAAGCCAGCCGTATCGTTGATGCCGCGGGTCGCTATATCGAG TTTTGCAAAGCCACGTTCCCGAACGAACTTAGCCTCAGTGAACTGAAGATTGTGGTGGATTGTGCAAACGGTGCGACTTA TCACATCGCGCCGAACGTGCTGCGCGAACTGGGGGCGAACGTTATCGCTATCGGTTGTGAGCCAAACGGTGTAAACATCA ATGCCGAAGTGGGGGCTACCGACGTTCGCGCGCTCCAGGCTCGTGTGCTGGCTGAAAAAGCGGATCTCGGTATTGCCTTC GACGGCGACGGCGATCGCGTGATTATGGTTGACCATGAAGGCAATAAAGTCGATGGCGATCAGATCATGTATATCATCGC GCGTGAAGGTCTTCGTCAGGGCCAGCTGCGTGGTGGTGCTGTGGGTACATTGATGAGCAACATGGGGCTTGAACTGGCGC TGAAACAGTTAGGAATTCCATTTGCGCGCGCGAAAGTGGGTGACCGCTACGTACTGGAAAAAATGCAGGAGAAAGGCTGG CGTATCGGTGCAGAGAATTCCGGTCATGTGATCCTGCTGGATAAAACCACTACCGGTGACGGCATCGTTGCTGGCTTGCA GGTGCTGGCGGCGATGGCACGTAACCATATGAGCCTGCACGACCTTTGCAGCGGCATGAAAATGTTCCCGCAGATTCTGG TTAACGTACGTTACACCGCAGGTAGCGGCGATCCGCTTGAGCATGAGTCAGTTAAAGCCGTGACCGCAGAGGTTGAAGCT GCGCTGGGCAACCGTGGACGCGTGTTGCTGCGTAAATCCGGCACCGAACCGTTAATTCGCGTGATGGTGGAAGGCGAAGA CGAAGCGCAGGTGACTGAATTTGCACACCGCATCGCCGATGCAGTAAAAGCCGTTTAA
Upstream 100 bases:
>100_bases ATGCAAGGCGCGCACATCATTCGTGTTCATGACGTCAAAGAAACCGTAGAAGCGATGCGGGTGGTGGAAGCCACTCTGTC TGCAAAGGAAAACAAACGCT
Downstream 100 bases:
>100_bases AGCGTTAGATAACTGGCTAAAAAGGCGGCGATTGTCGCCTTTTTTCTCGGCGAACACATCGGTTTTGCTGTTTTTTTCCG CAGTTGATACAATGCGATAA
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMP TPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAF DGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGW RIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEA ALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV
Sequences:
>Translated_445_residues MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMP TPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAF DGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGW RIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEA ALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV >Mature_444_residues SNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLESALEAGLAAAGLSALFTGPMPT PAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIEF CKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAFD GDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWR IGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEAA LGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI133922562, Length=368, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1789566, Length=445, Percent_Identity=100, Blast_Score=904, Evalue=0.0, Organism=Escherichia coli, GI1788361, Length=460, Percent_Identity=26.0869565217391, Blast_Score=100, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17535441, Length=305, Percent_Identity=27.5409836065574, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI17864244, Length=349, Percent_Identity=27.2206303724928, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 47544; Mature: 47413
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLES CCCCCCCCCCCCCCCCCCCCCCHHHHHEECHHHHHHHHHCCCEEEEEECCCCCHHHHHHH ALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTK HHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCC LPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIEFCKATFPNELSLSELKIVVD CCHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE CANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAF ECCCCEEEECHHHHHHCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEE DGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIP CCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCC FARAKVGDRYVLEKMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLH HHHHHCCHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHH DLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEAALGNRGRVLLRKSGTEPLIR HHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEE VMVEGEDEAQVTEFAHRIADAVKAV EEECCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIIGKDTRISGYMLES CCCCCCCCCCCCCCCCCCCCCHHHHHEECHHHHHHHHHCCCEEEEEECCCCCHHHHHHH ALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTK HHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCC LPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIEFCKATFPNELSLSELKIVVD CCHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE CANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAF ECCCCEEEECHHHHHHCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEE DGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIP CCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCC FARAKVGDRYVLEKMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLH HHHHHCCHHHHHHHHHHCCCEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHH DLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEAALGNRGRVLLRKSGTEPLIR HHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEE VMVEGEDEAQVTEFAHRIADAVKAV EEECCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA