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The map label for this gene is yraN

Identifier: 30064488

GI number: 30064488

Start: 3278717

End: 3279112

Strand: Direct

Name: yraN

Synonym: S3406

Alternate gene names: 30064488

Gene position: 3278717-3279112 (Clockwise)

Preceding gene: 30064487

Following gene: 30064489

Centisome position: 71.29

GC content: 54.8

Gene sequence:

>396_bases
ATGGCTACAGTACCAACAAGGTCAGGTAGTCCCCGCCAGTTAACCACCAAACAGACCGGCGATGCGTGGGAAGCACAAGC
GCGTCGCTGGCTGGAAGGCAAAGGACTGCGGTTTATCGCCGCTAACGTGAACGAGCGTGGCGGCGAGATCGATCTGATAA
TGCGTGAAGGCCTGACCACCGTTTTTGTCGAGGTACGCTATCGCCGCTCTGCGCTTTATGGCGGCGCGGCAGCCAGTGTG
ACCCGCAGCAAACAACACAAATTATTACAGACTGCCCGCTTGTGGCTCGCGCGTCATAATGGGAGTTTTGATACTGTGGA
TTGCCGGTTCGATGTGGTAGCCTTCACCGGGAATGAGGTTGAGTGGATTAAGGATGCCTTTAATGACCACTCATAA

Upstream 100 bases:

>100_bases
ATCATTTCTCACAAATGCGCCAGGTTCAGGGTTTTGAAATCAACGGTAATACCGGAAGTCTGACGGCTAACCCGGATTGC
GTGATTAACAGGAAGTTATC

Downstream 100 bases:

>100_bases
TTAAGGTTTAAGGATTAGCGTGCAAGAAAGAATTAAAGCTTGCTTCACTGAAAGCATTCAAACTCAAATTGCGGCGGCAG
AGGCGCTTCCGGATGCCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGLTTVFVEVRYRRSALYGGAAASV
TRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAFNDHS

Sequences:

>Translated_131_residues
MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGLTTVFVEVRYRRSALYGGAAASV
TRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAFNDHS
>Mature_130_residues
ATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGLTTVFVEVRYRRSALYGGAAASVT
RSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEVEWIKDAFNDHS

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=131, Percent_Identity=98.4732824427481, Blast_Score=268, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 14741; Mature: 14610

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGLTT
CCCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCEE
VFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEV
EEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCH
EWIKDAFNDHS
HHHHHHCCCCC
>Mature Secondary Structure 
ATVPTRSGSPRQLTTKQTGDAWEAQARRWLEGKGLRFIAANVNERGGEIDLIMREGLTT
CCCCCCCCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCEE
VFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGSFDTVDCRFDVVAFTGNEV
EEEEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCH
EWIKDAFNDHS
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA