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The map label for this gene is tdcR

Identifier: 30064462

GI number: 30064462

Start: 3249879

End: 3250223

Strand: Direct

Name: tdcR

Synonym: S3371

Alternate gene names: 30064462

Gene position: 3249879-3250223 (Clockwise)

Preceding gene: 30064451

Following gene: 30064463

Centisome position: 70.66

GC content: 31.88

Gene sequence:

>345_bases
ATGACGGGGATAACCATATTTTATGGCGATAACATCATTCGTTATGTGGTTAATACAAAAAAGGGGCTGAGACCATATTT
CAAGCAATTACCGGATAATTACCAGGCAAAATTTGAGTTAAATTTAATGAGCAAGTTCTCAAATTTTATTATAAATAAAC
CATTTTCAGCGATAAATACTGCGGCACGTCACATTTTTTCACGCTATTTGTTGGAGAACAAACATTTATTTTATCAATAT
TTTAAAATTTCGAATACAGGTATTGATCATCTCGAACAATTGATTAACGTCAACTTTTTCTCTTCTGACAGGACGTCATT
TTGTGAATGCAATCGTTTTCCATAA

Upstream 100 bases:

>100_bases
CATTACTTTCCAAGGTATCGTTATTACAATTAAACATCTTTAAATATCAACAAGTTAAAGCATAAAAATCAGCATAAACC
CTGATTTTTATCAAAAAAAA

Downstream 100 bases:

>100_bases
ATTCTTCTCCCCTCATAGGCGACGAATAGCATTTTGTGTTGAGGATCACAAAACGAATAATTGCTGGTCGCCGCGATAAG
GTCAGACGAAGTCAACAAGG

Product: DNA-binding transcriptional activator TdcR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQY
FKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP

Sequences:

>Translated_114_residues
MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQY
FKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP
>Mature_113_residues
TGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYF
KISNTGIDHLEQLINVNFFSSDRTSFCECNRFP

Specific function: Probable trans-acting positive activator for the tdc operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082214, Length=72, Percent_Identity=94.4444444444444, Blast_Score=138, Evalue=7e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13540; Mature: 13409

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINT
CCCEEEEECCCEEEEEHHCCCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHH
AARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP
HHHHHHHHHHHCCCHHEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMSKFSNFIINKPFSAINT
CCEEEEECCCEEEEEHHCCCCCCHHHHHCCCCCCEEEEHHHHHHHHHHHHCCCHHHHHH
AARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSSDRTSFCECNRFP
HHHHHHHHHHHCCCHHEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2660107; 2573820; 9278503; 7928991 [H]