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The map label for this gene is yqjD

Identifier: 30064444

GI number: 30064444

Start: 3232456

End: 3232761

Strand: Direct

Name: yqjD

Synonym: S3349

Alternate gene names: 30064444

Gene position: 3232456-3232761 (Clockwise)

Preceding gene: 30064443

Following gene: 30064445

Centisome position: 70.28

GC content: 54.25

Gene sequence:

>306_bases
ATGTCGAAAGAACACACTACGGAACATCTGCGTGCTGAGTTGAAATCCCTTTCCGATACGCTGGAAGAGGTGCTTAGCTC
ATCTGGCGAGAAGTCGAAAGAAGAGTTGAGTAAGATTCGTAGCAAAGCGGAGCAGGCACTGAAACAGAGCCGTTATCGCC
TGGGTGAAACCGGTGATGCCATCGCCAAACAAACCCGTGTCGCGGCGGCGCGTGCTGATGAGTATGTGCGTGAAAATCCG
TGGACCGGCGTGGGAATTGGCGCTGCAATCGGTGTAGTGCTCGGCGTTCTGCTGTCGCGTCGTTAA

Upstream 100 bases:

>100_bases
ATAGAACGGAAACTGGCAGAAGCGCAGGAAGAGCTGAAAAAGCTGGAAGCGCGCGACTACTAACTCACAATAGTCACTAC
TTACTCACCTGGAGAAAACT

Downstream 100 bases:

>100_bases
TTATGGCGGACACTCATCACGCGCAAGGGCCCGGTAAAAGCGTTCTGGGCATCGGGCAGCGAATTGTTTCCATCATGGTT
GAAATGGTGGAAACACGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDAIAKQTRVAAARADEYVRENP
WTGVGIGAAIGVVLGVLLSRR

Sequences:

>Translated_101_residues
MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDAIAKQTRVAAARADEYVRENP
WTGVGIGAAIGVVLGVLLSRR
>Mature_100_residues
SKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPW
TGVGIGAAIGVVLGVLLSRR

Specific function: Unknown

COG id: COG4575

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli elaB and ygaM

Homologues:

Organism=Escherichia coli, GI1789485, Length=101, Percent_Identity=100, Blast_Score=199, Evalue=4e-53,
Organism=Escherichia coli, GI1789027, Length=96, Percent_Identity=40.625, Blast_Score=71, Evalue=1e-14,
Organism=Escherichia coli, GI1788601, Length=85, Percent_Identity=36.4705882352941, Blast_Score=62, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQJD_ECO57 (P64583)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   C85971
- PIR:   D91126
- RefSeq:   NP_289672.1
- RefSeq:   NP_312007.1
- ProteinModelPortal:   P64583
- EnsemblBacteria:   EBESCT00000024109
- EnsemblBacteria:   EBESCT00000057327
- GeneID:   916205
- GeneID:   958574
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z4452
- KEGG:   ecs:ECs3980
- GeneTree:   EBGT00050000010837
- HOGENOM:   HBG648388
- OMA:   AKQTREA
- ProtClustDB:   CLSK880582
- BioCyc:   ECOL83334:ECS3980-MONOMER
- InterPro:   IPR010279

Pfam domain/function: PF05957 DUF883

EC number: NA

Molecular weight: Translated: 11052; Mature: 10920

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDA
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAEQALKQSRYRLGETGDA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796