| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yqjB
Identifier: 30064443
GI number: 30064443
Start: 3231549
End: 3231917
Strand: Direct
Name: yqjB
Synonym: S3347
Alternate gene names: 30064443
Gene position: 3231549-3231917 (Clockwise)
Preceding gene: 30064442
Following gene: 30064444
Centisome position: 70.26
GC content: 54.2
Gene sequence:
>369_bases ATGTCGCTTCGCCAGCTAGCCTGGTCCGGCACTGTTTTACTTCTGGTCGGCACGCTGTTGCTGGCCTGGTCCGCGGTTCG CCAGCAAGAGTCTACGCTGGCGATTCGTGCCGTTCATCAAGGCACAACGATGCCAGACGGTTTTTCGATCTGGCATCACC TTGACGCTCATGGCATTCCTTTCAAAAGTATCACCCCCAAAAACGACACTCTGTTAATTACATTTGACTCCAGCGACCAG AGCGCCGCCGCAAAAGCGGTCCTCGACAGAACATTGCCCCATGGCTACATCATTGCGCAGCAGGACAATAACAGTCAGGC TATGCAGTGGCTGACCCGGTTACGGGATAACTCTCATCGCTTCGGATAA
Upstream 100 bases:
>100_bases GCTCCCGGTGGTGCTGCTGGTGTTTGGCCTGGCAGGTTCTCTGGTCGTGTTATGGAAAAAGAAATATGGAAATCGGGGGT AAGGGATGCAAATACCTCGC
Downstream 100 bases:
>100_bases CTTCCTGTTATCCGAAACATATCACTCACTTTGGTGATTTCACCGTAACTGTCTATGATTAATGAGGCGGTGGTTAACAC TACCGCTTCGTTGTCTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQ SAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG
Sequences:
>Translated_122_residues MSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQ SAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG >Mature_121_residues SLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQS AAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHRFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789482, Length=122, Percent_Identity=99.1803278688525, Blast_Score=247, Evalue=2e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13577; Mature: 13445
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIP CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCHHHHCCCCCCCC FKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHR CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCC FG CC >Mature Secondary Structure SLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVHQGTTMPDGFSIWHHLDAHGIP CCHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCHHHHCCCCCCCC FKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYIIAQQDNNSQAMQWLTRLRDNSHR CCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCC FG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]