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The map label for this gene is ygiC

Identifier: 30064388

GI number: 30064388

Start: 3162220

End: 3163380

Strand: Direct

Name: ygiC

Synonym: S3283

Alternate gene names: 30064388

Gene position: 3162220-3163380 (Clockwise)

Preceding gene: 161486437

Following gene: 30064390

Centisome position: 68.75

GC content: 50.47

Gene sequence:

>1161_bases
ATGGAAAGAGTCAGTATTACCGAGCGCCCGGACTGGCGTGAGAAAGCCCACGAATACGGTTTCAATTTTCACACCATGTA
CGGCGAGCCGTACTGGTGTGAAGATGCTTACTACAAGTTGACCCTCGCCCAGGTTGAAAAGCTGGAAGAAGTCACCGCCG
AACTGCACCAGATGTGCCTGAAAGTGGTGGAAAAAGTGATCGCCAGCGATGAGCTGATGACCAAATTCCGCATACCAAAA
CACACCTGGAGTTTTGTGCGTCAATCATGGCTGACTCACCAGCCATCGCTTTATTCGCGTCTTGATCTGGCGTGGGATGG
CACTGGCGAACCTAAACTTCTGGAAAATAACGCCGATACGCCAACGTCACTATACGAGGCGGCGTTCTTTCAGTGGATCT
GGCTGGAAGATCAGCTTAACGCCGGTAACTTGCCGGAGGGCAGCGACCAGTTTAACAGTCTGCAAGAAAAACTGATCGAT
CGCTTCGTTGAGCTGCGTGAACAGTATGGCTTCCAGTTGCTGCATCTCACCTGCTGTCGCGACACGGTGGAAGATCGCGG
AACCATTCAGTATTTGCAGGACTGCGCAACCGAAGCTGAAATCGCCACCGAGTTCCTCTACATCGACGAGATAGGTTTAG
GCGAAAAAGGCCAGTTCACGGATTTACAGGATCAGGTGATTTCTAACCTGTTCAAGCTTTATCCGTGGGAATTTATGCTG
CGCGAAATGTTCTCCACCAAGCTGGAAGATGCTGGCGTACGCTGGCTGGAACCGGCGTGGAAGAGCATTATCTCCAACAA
GGCACTTCTACCGCTACTGTGGGAGATGTTCCCGAATCACCCGAACCTGCTGCCCGCTTATTTTGCGGAAGATGATCATC
CGCAAATGGAAAAATATGTGGTTAAACCGATCTTCTCCCGTGAAGGCGCAAACGTGTCGATCATTGAGAACGGCAAAACC
ATTGAAGCAGCGGAAGGTCCGTATGGCGAAGAAGGGATGATTGTTCAGCAATTCCACCCGTTACCGAAATTCGGCGACAG
CTATATGCTGATTGGTAGCTGGCTGGTGAACGATCAACCTGCCGGAATTGGCATTCGTGAAGACCGTGCGTTGATCACCC
AGGATATGTCTCGGTTTTATCCACATATTTTTGTTGAATAA

Upstream 100 bases:

>100_bases
CCGTTACCCGTGGCGGTTTTGGTGAATCTGTTGCCAAACAAAGCACTATGCAGCGTAGCGCAACCGGCACCTCTTCTCGT
TCAATGGGTGGCTGATACCG

Downstream 100 bases:

>100_bases
GCCACGATACCGGATGGCACTCGCCATCCGGTAATTGTTAGCCTATCTGCACCGACAGCATACTTAAACTGCCCATTTCT
ATACCATCGACCGGAATGGT

Product: putative synthetase/amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPK
HTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDEIGLGEKGQFTDLQDQVISNLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKT
IEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE

Sequences:

>Translated_386_residues
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPK
HTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDEIGLGEKGQFTDLQDQVISNLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKT
IEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE
>Mature_386_residues
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPK
HTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDEIGLGEKGQFTDLQDQVISNLFKLYPWEFML
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKT
IEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE

Specific function: Unknown

COG id: COG0754

COG function: function code E; Glutathionylspermidine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To the N-terminal of E.coli gsp and to E.coli yjfC [H]

Homologues:

Organism=Escherichia coli, GI1789416, Length=386, Percent_Identity=99.7409326424871, Blast_Score=803, Evalue=0.0,
Organism=Escherichia coli, GI1790629, Length=387, Percent_Identity=50.3875968992248, Blast_Score=397, Evalue=1e-112,
Organism=Escherichia coli, GI1789361, Length=392, Percent_Identity=27.8061224489796, Blast_Score=134, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005494
- InterPro:   IPR016185 [H]

Pfam domain/function: PF03738 GSP_synth [H]

EC number: NA

Molecular weight: Translated: 45040; Mature: 45040

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCL
CCCCCCCCCCCHHHHHHHCCCCEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCEECCCCCC
PTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCR
HHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHH
DTVEDRGTIQYLQDCATEAEIATEFLYIDEIGLGEKGQFTDLQDQVISNLFKLYPWEFML
HHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHH
VKPIFSREGANVSIIENGKTIEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQP
HHHHHCCCCCEEEEEECCCEEECCCCCCCCCCEEHHHCCCCCCCCCCEEEEEEEEECCCC
AGIGIREDRALITQDMSRFYPHIFVE
CCCCCCCCHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLTLAQVEKLEEVTAELHQMCL
CCCCCCCCCCCHHHHHHHCCCCEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
KVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLDLAWDGTGEPKLLENNADT
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHEEEEECCCCCCCEECCCCCC
PTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLIDRFVELREQYGFQLLHLTCCR
HHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHH
DTVEDRGTIQYLQDCATEAEIATEFLYIDEIGLGEKGQFTDLQDQVISNLFKLYPWEFML
HHHHCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHH
REMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEMFPNHPNLLPAYFAEDDHPQMEKYV
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHCCCCCCHHHHHHH
VKPIFSREGANVSIIENGKTIEAAEGPYGEEGMIVQQFHPLPKFGDSYMLIGSWLVNDQP
HHHHHCCCCCEEEEEECCCEEECCCCCCCCCCEEHHHCCCCCCCCCCEEEEEEEEECCCC
AGIGIREDRALITQDMSRFYPHIFVE
CCCCCCCCHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]