| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yeeW
Identifier: 30064317
GI number: 30064317
Start: 3088315
End: 3088803
Strand: Direct
Name: yeeW
Synonym: S3205
Alternate gene names: 30064317
Gene position: 3088315-3088803 (Clockwise)
Preceding gene: 30064316
Following gene: 30064318
Centisome position: 67.15
GC content: 53.99
Gene sequence:
>489_bases ATGAAACTGGCCCTGACGCTGGAAGCCGACAGCGTTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGA TGGTGTTAATCTCAGTGAACTGATTAACAAGGTCTCTGAAAACGGTTATTCACTCCGCGTGGTCGATAAATCCGACCAAC ACGCAACCAGTACACCACCACCGTTAACAACCCTTACCTGCATACGTTGCAGCACCGCACATATCACGGAAACGGACAAC GCCTGGCTGTACTCGCTGTCACACCAGACTAATGACGACGGCGAAACAGAATGGATTCATTTTACAGGCAGCGGCTATCT GTTACGTACCGATGCATGGTCGTACCCGGTTCTGCGGCTTAAACGCCTGGGCCTGTCCAGAACGTTCCGTCGTCTGGTCG TCACTCTCACCCGGCGTTATGGCGTCAGTCTCATTCATCTGGACGCCGGCGCAGAATGTCTGCCGGGGTTCCCCACTTTC GACTGGTAA
Upstream 100 bases:
>100_bases TTGATATTCTCCGGGCACGCCGGGCAACCGGCCTGATGACCCGCGATAACTACAGAACGGTAAATAACATTACCCGGGGG AAGCATCCGGAAGCGAAACA
Downstream 100 bases:
>100_bases TCAGGACAAAAGACACTGGATGAAATTATTAACCACAGAAACGGCGCTGGATATTCTGATTGCGTGGCTGCAGGACAATA TTGACTGCGAATCAGGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKLALTLEADSVNVQALNMGRIVVDVDGVNLSELINKVSENGYSLRVVDKSDQHATSTPPPLTTLTCIRCSTAHITETDN AWLYSLSHQTNDDGETEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSRTFRRLVVTLTRRYGVSLIHLDAGAECLPGFPTF DW
Sequences:
>Translated_162_residues MKLALTLEADSVNVQALNMGRIVVDVDGVNLSELINKVSENGYSLRVVDKSDQHATSTPPPLTTLTCIRCSTAHITETDN AWLYSLSHQTNDDGETEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSRTFRRLVVTLTRRYGVSLIHLDAGAECLPGFPTF DW >Mature_162_residues MKLALTLEADSVNVQALNMGRIVVDVDGVNLSELINKVSENGYSLRVVDKSDQHATSTPPPLTTLTCIRCSTAHITETDN AWLYSLSHQTNDDGETEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSRTFRRLVVTLTRRYGVSLIHLDAGAECLPGFPTF DW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18110; Mature: 18110
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLALTLEADSVNVQALNMGRIVVDVDGVNLSELINKVSENGYSLRVVDKSDQHATSTPP CEEEEEEECCCEEEEEEECCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC PLTTLTCIRCSTAHITETDNAWLYSLSHQTNDDGETEWIHFTGSGYLLRTDAWSYPVLRL CCCEEEEEEECCCEEEECCCEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHH KRLGLSRTFRRLVVTLTRRYGVSLIHLDAGAECLPGFPTFDW HHCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MKLALTLEADSVNVQALNMGRIVVDVDGVNLSELINKVSENGYSLRVVDKSDQHATSTPP CEEEEEEECCCEEEEEEECCEEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCC PLTTLTCIRCSTAHITETDNAWLYSLSHQTNDDGETEWIHFTGSGYLLRTDAWSYPVLRL CCCEEEEEEECCCEEEECCCEEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCCHHHHH KRLGLSRTFRRLVVTLTRRYGVSLIHLDAGAECLPGFPTFDW HHCCHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]