Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is fldB
Identifier: 30064207
GI number: 30064207
Start: 2965859
End: 2966380
Strand: Direct
Name: fldB
Synonym: S3080
Alternate gene names: 30064207
Gene position: 2965859-2966380 (Clockwise)
Preceding gene: 30064203
Following gene: 30064210
Centisome position: 64.48
GC content: 51.15
Gene sequence:
>522_bases ATGAATATGGGTCTTTTTTACGGTTCCAGCACCTGTTACACCGAAATGGCGGCAGAAAAAATCCGCGATATTATCGGCCC AGAACTGGTGACCTTACATAACCTCAAGGACGACTCCCCGAAATTAATGGAGCAGTACGATGTGCTCATTCTGGGTATCC CGACCTGGGATTTTGGTGAAATCCAGGAAGACTGGGAAGCCGTCTGGGATCAGCTCGACGACCTGAACCTTGAAGGTAAA ATTATTGCGCTGTATGGGCTTGGCGATCAACTGGGATACGGCGAGTGGTTCCTCGATGCGCTCGGTATGCTGCATGACAA ACTCTCGACCAAAGGCGTGAAGTTCGTCGGCTACTGGCCAACGGAAGGATATGAATTTACCAGCCCGAAACCGGTGATTG CTGACGGGCAACTGTTCGTGGGTCTGGCGCTGGATGAAACTAACCAGTATGACCTTAGCGACGAGCGTATTCAGAGCTGG TGCGAGCAAATCCTCAACGAAATGGCAGAGCATTACGCCTGA
Upstream 100 bases:
>100_bases ATGGTCACTCATTTGATCCATTATGCCTTATTGTGCCGTGACTAAAGCGATTCTGATACACTAGCTGCAAAAGCCACAGC AGAATCGAGAAGCTTACGTT
Downstream 100 bases:
>100_bases TCTCACTGACGGCTTAGCGCATATGCTTTGCCGTCATCTTTATCTTTGCGTCTCTTGTTGCAACAAAATCCGCCGTAAAT CCCGCCATTCGGCTTCGTCC
Product: flavodoxin FldB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLMEQYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGK IIALYGLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW CEQILNEMAEHYA
Sequences:
>Translated_173_residues MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLMEQYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGK IIALYGLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW CEQILNEMAEHYA >Mature_173_residues MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLMEQYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGK IIALYGLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW CEQILNEMAEHYA
Specific function: Low-potential electron donor to a number of redox enzymes (Potential) [H]
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Escherichia coli, GI1789262, Length=173, Percent_Identity=99.4219653179191, Blast_Score=354, Evalue=2e-99, Organism=Escherichia coli, GI1786900, Length=165, Percent_Identity=43.030303030303, Blast_Score=149, Evalue=9e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008254 - InterPro: IPR001226 - InterPro: IPR010086 [H]
Pfam domain/function: PF00258 Flavodoxin_1 [H]
EC number: NA
Molecular weight: Translated: 19714; Mature: 19714
Theoretical pI: Translated: 3.85; Mature: 3.85
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLMEQYDVLILGIPTWDFGE CCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCCHH IQEDWEAVWDQLDDLNLEGKIIALYGLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWP HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC TEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSWCEQILNEMAEHYA CCCEECCCCCCEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLMEQYDVLILGIPTWDFGE CCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHCCEEEEECCCCCCHH IQEDWEAVWDQLDDLNLEGKIIALYGLGDQLGYGEWFLDALGMLHDKLSTKGVKFVGYWP HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC TEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSWCEQILNEMAEHYA CCCEECCCCCCEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]