Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is surE
Identifier: 30064101
GI number: 30064101
Start: 2836354
End: 2837115
Strand: Reverse
Name: surE
Synonym: S2960
Alternate gene names: 30064101
Gene position: 2837115-2836354 (Counterclockwise)
Preceding gene: 30064102
Following gene: 30064100
Centisome position: 61.69
GC content: 54.46
Gene sequence:
>762_bases ATGCGCATATTGCTGAGTAATTATGACGGGGTACATGCACCCGGTATACAAACGCTGGCGAAAGCCTTGCGTGAGTTTGC TGACGTTCAGGTGGTCGCCCCCGATCGTAACCGCAGCGGCGCTTCAAATTCTCTGACACTGGAATCCTCCCTGCGCACGT TTACCTTTGAAAATGGTGATATTGCTGTGCAAATGGGAACCCCGACCGATTGTGTCTATCTTGGCGTGAATGCTCTGATG CGTCCGCGCCCGGACATTGTTGTGTCCGGAATTAACGCCGGGCCGAATCTGGGGGATGATGTTATTTATTCCGGTACGGT AGCCGCCGCGATGGAAGGCCGTCATTTAGGTTTTCCGGCGCTGGCCGTCTCGCTTGACGGGCATAAACATTACGACACTG CCGCGGCGGTAACCTGTTCAATTTTGCGCGCACTGTGTAAAGAGCCGCTGCGCACCGGACGTATTCTTAATATTAACGTT CAGGATTTACCCTTGGATCAAATCAAAGGTATTCGCGTGACGCGCTGCGGTACACGACATCCGGCAGATCAGGTGATCCC GCAGCAAGATCCGCGCGGCAATACGCTGTACTGGATTGGCCCGCCGGGCGGTAAATGTGATGCCGGTCCGGGGACCGATT TTGCTGCGGTAGATGAGGGCTATGTCTCCATCACGCCGCTGCATGTGGATTTAACTGCGCATAGCGCGCAAGATGTGGTT TCAGACTGGTTAAACAGCGTGGGAGTTGGCACGCAATGGTAA
Upstream 100 bases:
>100_bases AACTGGTGGGATGACGTCACCGTAGAGATCCGTTTCTGGCTTCCGGCGGGTAGTTTTGCAACCAGCGTTGTCAGGGAACT TATCAACACAACAGGTGATT
Downstream 100 bases:
>100_bases GCAGACGCGTACAAGCACTTCTGGATCAATTACGTGCGCAAGGTATTCAGGATGAGCAGGTGCTGAATGCACTTGCCGCC GTGCCGCGTGAAAAATTCGT
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: 5'/3'-nucleotidase; Nucleoside monophosphate phosphohydrolase; Exopolyphosphatase [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MRILLSNYDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALM RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV QDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV SDWLNSVGVGTQW
Sequences:
>Translated_253_residues MRILLSNYDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALM RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV QDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV SDWLNSVGVGTQW >Mature_253_residues MRILLSNYDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALM RPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV QDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV SDWLNSVGVGTQW
Specific function: Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5'- monophosphates and ribonucleoside 3'-monophosphates with highest affinity to 3'-AMP. Also hydrolyzes polyphosphate (exopolyphosphatase acti
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family [H]
Homologues:
Organism=Escherichia coli, GI1789101, Length=253, Percent_Identity=99.2094861660079, Blast_Score=512, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002828 [H]
Pfam domain/function: PF01975 SurE [H]
EC number: =3.1.3.5; =3.1.3.6; =3.6.1.11 [H]
Molecular weight: Translated: 26980; Mature: 26980
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLSNYDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGD CEEEEECCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCEEEEECCCEEEEEECCC IAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA EEEEECCCCCEEEECHHHHCCCCCCEEEECCCCCCCCCCCEEECCEEEEEECCCCCCCCE LAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVQDLPLDQIKGIRVTRCGTRH EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCEEEEECCCCC PADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV CHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEEEEEECCCHHHHH SDWLNSVGVGTQW HHHHHHCCCCCCC >Mature Secondary Structure MRILLSNYDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGD CEEEEECCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCCCCCEEEEECCCEEEEEECCC IAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPA EEEEECCCCCEEEECHHHHCCCCCCEEEECCCCCCCCCCCEEECCEEEEEECCCCCCCCE LAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVQDLPLDQIKGIRVTRCGTRH EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCEEEEECCCCC PADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVV CHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEEEEEECCCHHHHH SDWLNSVGVGTQW HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA