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The map label for this gene is ygaC

Identifier: 30064039

GI number: 30064039

Start: 2768180

End: 2768524

Strand: Reverse

Name: ygaC

Synonym: S2885

Alternate gene names: 30064039

Gene position: 2768524-2768180 (Counterclockwise)

Preceding gene: 30064052

Following gene: 30064037

Centisome position: 60.19

GC content: 46.67

Gene sequence:

>345_bases
ATGTATTTACGACCAGACGAGGTGGCGCGCGTACTTGAAAAAGTCGGTTTTACTGTCGATGTGGTAACCCAGAAAGCGTA
TGGTTACCGCCGTGGGGAAAATTATGTCTATGTTAATCGCGAAGCGCGAATGGGACGTACCGCTCTGGTAATTCATCCAA
CATTAAAAGAACGCAGTTCAACACTGGCTGAACCCGCTTCCGATATTAAAACTTGCGATCATTACCAGCAATTTCCGCTC
TATTTAGCAGGCGAGCGACACGAGCATTACGGTATCCCGCATGGCTTTAGTTCGCGTGTTGCGCTTGAACGTTATTTGAA
TGGTTTATTTGGCGAAGCCAGTTAA

Upstream 100 bases:

>100_bases
TTAACTGAGGTTCATCGCGGCTTTATGGACTTTTCTGAAAGCGTTGTGAATGCGCAATCAGGTAAGGTAGGCCCGCGGTT
GAAAATAACGAGGATCAAAT

Downstream 100 bases:

>100_bases
AGACGCGACTGGCGATGCCAGTCGCGAAAAGAAGAGTCAGGCTTTTACCTGCTGGTAACGGCTGACTTTAAACAGTCGGC
GGCAATAATCGAGGAAGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPL
YLAGERHEHYGIPHGFSSRVALERYLNGLFGEAS

Sequences:

>Translated_114_residues
MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPL
YLAGERHEHYGIPHGFSSRVALERYLNGLFGEAS
>Mature_114_residues
MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPL
YLAGERHEHYGIPHGFSSRVALERYLNGLFGEAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789026, Length=114, Percent_Identity=100, Blast_Score=236, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YGAC_ECO57 (P0AD55)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   D91070
- PIR:   G85914
- RefSeq:   NP_289221.1
- RefSeq:   NP_311559.1
- ProteinModelPortal:   P0AD55
- SMR:   P0AD55
- EnsemblBacteria:   EBESCT00000028505
- EnsemblBacteria:   EBESCT00000057092
- GeneID:   914752
- GeneID:   956958
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z3971
- KEGG:   ecs:ECs3532
- GeneTree:   EBGT00050000011489
- HOGENOM:   HBG416918
- OMA:   GFSSRMA
- ProtClustDB:   PRK10556
- BioCyc:   ECOL83334:ECS3532-MONOMER
- InterPro:   IPR018994

Pfam domain/function: PF09400 DUF2002

EC number: NA

Molecular weight: Translated: 13066; Mature: 13066

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSS
CCCCHHHHHHHHHHHCCEEEEEHHHHCCCCCCCCEEEECCCCCCCCEEEEEECCHHHHHH
TLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVALERYLNGLFGEAS
HHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARMGRTALVIHPTLKERSS
CCCCHHHHHHHHHHHCCEEEEEHHHHCCCCCCCCEEEECCCCCCCCEEEEEECCHHHHHH
TLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVALERYLNGLFGEAS
HHCCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796