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The map label for this gene is yfjD

Identifier: 30064011

GI number: 30064011

Start: 2742550

End: 2743233

Strand: Direct

Name: yfjD

Synonym: S2850

Alternate gene names: 30064011

Gene position: 2742550-2743233 (Clockwise)

Preceding gene: 30064010

Following gene: 30064013

Centisome position: 59.63

GC content: 51.32

Gene sequence:

>684_bases
ATGACCGTTGATGACATCATGGTACCGCGCAGTGAAATTATCGGTATTGATATCAACGATGACTGGAAATCTATTCTGCG
CCAACTCTCCCACTCACCTCACGGGCGCATCGTGCTTTACCGTGATTCGCTGGACGACGCCATCAGTATGCTGCGAGTAC
GTGAAGCCTGGCGGTTGATGTCGGAGAAAAAAGAGTTCACCAAAGAAACCATGCTGCGCGCCGCGGACGAGATCTATTTT
GTGCCTGAAGGTACGCCGCTCAGCACGCAGTTGGTAAAGTTTCAGCGCAACAAAAAGAAAGTCGGCCTGGTCGTCAACGA
GTATGGAGACATTCAGGGGCTGGTGACGGTTGAAGATATTCTGGAAGAGATTGTTGGCGATTTCACTACGTCGATGTCGC
CAACACTTGCCGAAGAGGTCACGCCGCAAAACGACGGTTCGGTGATTATCGATGGCACCGCCAACGTGCGGGAAATCAAC
AAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAATGGCGTCATTCTTGAGGCACTGGAAGAGATCCC
TGTCGCAGGCACCCGCGTGCGTATTGGCAAGTACGATATCGATATTCTCGACGTACAGGACAATATGATTAAGCAGGTAA
AAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAA

Upstream 100 bases:

>100_bases
TTTGAGCAAAGAAGAGTTGCGCACTATCGTGCATGAATCGCGCTCACAAATTTCCCGTCGCAATCAGGATATGCTGCTGT
CGGTGCTCGATCTGGAAAAA

Downstream 100 bases:

>100_bases
CGAAAACGGCCCTGCATTCGCATGCAGGGCCGTGAATTATTACGAAAACAGAAATTACGCTTTTGCTTTCGCTACAGTTA
CCATCGCCGCACGAATCGTA

Product: putative transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYF
VPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREIN
KAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGKYDIDILDVQDNMIKQVKVFPVKPLRESVAE

Sequences:

>Translated_227_residues
MTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYF
VPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREIN
KAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGKYDIDILDVQDNMIKQVKVFPVKPLRESVAE
>Mature_226_residues
TVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAADEIYFV
PEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINK
AFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGKYDIDILDVQDNMIKQVKVFPVKPLRESVAE

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=175, Percent_Identity=26.2857142857143, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI145693175, Length=227, Percent_Identity=99.5594713656388, Blast_Score=463, Evalue=1e-132,
Organism=Escherichia coli, GI1786879, Length=214, Percent_Identity=26.6355140186916, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI87082033, Length=222, Percent_Identity=27.4774774774775, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788119, Length=217, Percent_Identity=30.4147465437788, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1790664, Length=216, Percent_Identity=20.8333333333333, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 25693; Mature: 25562

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLM
CCCCCCCCCHHHEEEEEECHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
SEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDI
HHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHH
LEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVIL
HHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHH
EALEEIPVAGTRVRIGKYDIDILDVQDNMIKQVKVFPVKPLRESVAE
HHHHHCCCCCCEEEECEECEEEEECCHHHHHHEEECCCCHHHHHHCC
>Mature Secondary Structure 
TVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLM
CCCCCCCCHHHEEEEEECHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
SEKKEFTKETMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDI
HHHHHHHHHHHHHHHHCEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEHHHH
LEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVIL
HHHHHHHHHCCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCHHHHHHHHH
EALEEIPVAGTRVRIGKYDIDILDVQDNMIKQVKVFPVKPLRESVAE
HHHHHCCCCCCEEEECEECEEEEECCHHHHHHEEECCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]