Definition | Shigella flexneri 2a str. 2457T, complete genome. |
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Accession | NC_004741 |
Length | 4,599,354 |
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The map label for this gene is yfiL
Identifier: 30064002
GI number: 30064002
Start: 2734645
End: 2735010
Strand: Direct
Name: yfiL
Synonym: S2839
Alternate gene names: 30064002
Gene position: 2734645-2735010 (Clockwise)
Preceding gene: 30063999
Following gene: 30064003
Centisome position: 59.46
GC content: 45.9
Gene sequence:
>366_bases ATGATGAAAAAGTTTATCGCCCCCTTGTTGGCTTTACTGGTTAGCGGATGTCAGATTGATCCTTATACTCACGCGCCAAC CTTGACCAGCACCGACTGGTATGATGTCGGTATGGAAGATGCGATATCGGGCAGCGCCATAAAAGATGACGATGCATTTA GCGATTCACAGGCGGATCGCGGTCTATACCTTAAAGGATATGCCGAAGGGCAAAAGAAAACTTGCCAGACCGATTTTACT TATGCCCGGGGACTTTCCGGTAAAAGCTTTCCTGCCAGCTGCAACAATGTTGAAAATGCCAGCCAACTGCATGAAGTATG GCAAAAAAGGGCTGATGAAAATGCCAGCACAATACGATTAAATTAA
Upstream 100 bases:
>100_bases ACACAGGCAATTTAGTCGCGCTTTCAACCCTTGCTTCTGTATAGATAAATTTACATCCCCTTTAAAAACAATCCGCTATG CTTTGAAAAAGGAGAAAGAA
Downstream 100 bases:
>100_bases TTAAAACCCCACAAATAAATTAAACATAAGATTTTACTCATTGTGTTTTATTTCTCACATTGATGACGGTCGCATGAAAA AATGATATTTTAATGAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFT YARGLSGKSFPASCNNVENASQLHEVWQKRADENASTIRLN
Sequences:
>Translated_121_residues MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFT YARGLSGKSFPASCNNVENASQLHEVWQKRADENASTIRLN >Mature_121_residues MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFT YARGLSGKSFPASCNNVENASQLHEVWQKRADENASTIRLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082135, Length=121, Percent_Identity=99.1735537190083, Blast_Score=252, Evalue=5e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021242 [H]
Pfam domain/function: PF10973 DUF2799 [H]
EC number: NA
Molecular weight: Translated: 13303; Mature: 13303
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADR CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC GLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQLHEVWQKRADENASTIRL CEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE N C >Mature Secondary Structure MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADR CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCC GLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQLHEVWQKRADENASTIRL CEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6396419; 9205837; 9278503 [H]