| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is bglX
Identifier: 30063579
GI number: 30063579
Start: 2221951
End: 2224248
Strand: Reverse
Name: bglX
Synonym: S2346
Alternate gene names: 30063579
Gene position: 2224248-2221951 (Counterclockwise)
Preceding gene: 161486468
Following gene: 30063578
Centisome position: 48.36
GC content: 53.92
Gene sequence:
>2298_bases ATGAAATGGCTATGTTCAGTAGGAATCGCGGTGAGTCTGGTCCTGCAGCCAGCACTGGCGGATGATTTATTCGGTAACCA TCCATTAACGCCTGAAGCGCGGGATGCGTTCGTCACCGATCTGCTCAAGAAAATGACGGTTGATGAGAAAATTGGTCAGC TGCGCTTAATCAGCGTAGGCCCGGATAATCCGAAAGAGGCGATCCGCGAGATGATCAAAGACGGTCAGGTTGGGGCGATT TTCAACACCGTAACCCGTCAGGATATCCGCGCCATGCAGGATCAGGTGATGGAATTAAGCCGCCTGAAAATTCCTCTTTT CTTTGCTTACGACGTGCTGCACGGTCAGCGCACGGTGTTCCCGATTAGCCTCGGTCTGGCCTCGTCTTTTAACCTCGATG CGGTGAAAACGGTCGGGCGTGTCTCTGCTTATGAAGCGGCAGATGATGGCCTGAATATGACCTGGGCACCGATGGTCGAT GTCTCGCGCGATCCGCGCTGGGGACGTGCTTCCGAAGGTTTTGGCGAAGATACGTATCTCACCTCAATAATGGGTAAAAC CATGGTGGAAGCGATGCAGGGTAAAAGCCCGGCAGATCGTTACTCGGTGATGACCAGCGTCAAACACTTTGCCGCATACG GCGCGGTAGAAGGCGGTAAAGAGTACAACACCGTCGATATGAGTCCGCAGCGCCTGTTTAATGATTATATGCCGCCGTAC AAAGCGGGGCTGGACGCAGGCAGCGGCGCGGTGATGGTGGCGCTGAACTCGCTGAACGGCACGCCAGCCACCTCCGATTC CTGGCTGCTGAAAGATGTTCTGCGCGACCAGTGGGGCTTTAAAGGCATCACCGTTTCCGATCACGGTGCAATCAAAGAGC TGATTAAACATGGCACGGCGGCAGACCCGGAAGATGCGGTGCGCGTGGCGCTGAAATCCGGAATCAACATGAGTATGAGC GACGAGTACTACTCGAAGTATCTGCCTGGGTTGATTAAATCCGGCAAAGTGACCATGGCAGAGCTGGACGATGCTGCCCG CCATGTACTGAACGTTAAATATGATATGGGGTTGTTTAACGACCCATACAGCCATTTGGGGCCGAAAGAGTCTGACCCGG TGGATACCAATGCCGAAAGCCGCCTGCACCGTAAAGAAGCGCGTGAAGTGGCGCGCGAAAGCCTGGTGTTGCTGAAAAAC CGTCTCGAAACGTTACCGCTGAAAAAATCGGCCACCATTGCGGTGGTTGGGCCACTGGCGGACAGTAAACGTGACGTGAT GGGCAGCTGGTCCGCAGCCGGTGTTGCCGATCAATCCGTGACCGTACTGACCGGGATTAAAAATTCCGTCGGTGAAAACG GTAAAGTGCTGTATGCCAAAGGGGCGAACGTTACCAGTGACAAAGGCATTATCGATTTCCTGAATCAGTATGAAGAAGCG GTCAAAGTCGATCCGCGTTCGCCGCAAGAGATGATTGATGAAGCGGTGCAGACGGCGAAACAATCTGATGTGGTGGTGGC TGTAGTCGGTGAAGCACAGGGGATGGCGCACGAAGCCTCCAGCCGGACCGATATCACTATTCCGCAAGGCCAACGTGACT TGATTGCGGCGCTGAAAGCCACCGGTAAACCGCTGGTGCTGGTGCTGATGAACGGGCGTCCGCTGGCGCTGGTGAAAGAA GATCAGCAGGCTGATGCGATTCTGGAAACCTGGTTTGCGGGGACTGAAGGCGGTAATGCAATTGCCGATGTATTGTTTGG CGATTACAACCCGTCCGGCAAGCTGCCAATTTCCTTCCCGCGTTCTGTCGGGCAGATCCCGGTGTACTACAGCCATCTGA ACACCGGTCGTCCGTATAATGCCGACAAGCCGAACAAATATACTTCGCGTTATTTTGATGAAGCTAACGGAGCGCTTTAT CCGTTCGGCTATGGTCTGAGCTATACCACTTTCACCGTCTCTGATGTGAAACTTTCTGCGCCGACCATGAAGCGTGACGG CAAAGTGACGGCCAGCGTGCAGGTGACGAACACCGGTAAGCGCGAGGGGGCCACGGTAGTGCAGATGTACTTGCAGGATG TGACGGCTTCCATGAGTCGCCCTGTGAAACAGCTGAAAGGCTTTGAGAAAATCACCCTGAAACCGGGCGAAACTCAGACT GTCAGCTTCCCGATCGATATTGAGGCGCTGAAGTTCTGGAATCAACAGATGAAATATGACGCCGAGCCTGGCAAGTTCAA TGTATTTATCGGCACTGATTCCGCACGCGTTAAGAAAGGCGAGTTTGAGTTGCTGTAA
Upstream 100 bases:
>100_bases AACTGAGCATTCTTTTTCTCTCTCCATCATGCTTATGGCAAACTACGGTTTTTGCACCATTTTCGCTGCCACGTCGGGCA ACAAAGGAAGAAAAATCCAT
Downstream 100 bases:
>100_bases TGCTTTAGTAAGGGCGCGACGTTTGCGCCCTTTGCCTGATGTTCATATCTTAACTTGCTGAATTTTCGCCCTTTGTAGGC CGGATAAGGCGCTCGCGCCG
Product: beta-D-glucoside glucohydrolase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 765; Mature: 765
Protein sequence:
>765_residues MKWLCSVGIAVSLVLQPALADDLFGNHPLTPEARDAFVTDLLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAI FNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD VSRDPRWGRASEGFGEDTYLTSIMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMS DEYYSKYLPGLIKSGKVTMAELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKN RLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNSVGENGKVLYAKGANVTSDKGIIDFLNQYEEA VKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQGQRDLIAALKATGKPLVLVLMNGRPLALVKE DQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPISFPRSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALY PFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL
Sequences:
>Translated_765_residues MKWLCSVGIAVSLVLQPALADDLFGNHPLTPEARDAFVTDLLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAI FNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD VSRDPRWGRASEGFGEDTYLTSIMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMS DEYYSKYLPGLIKSGKVTMAELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKN RLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNSVGENGKVLYAKGANVTSDKGIIDFLNQYEEA VKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQGQRDLIAALKATGKPLVLVLMNGRPLALVKE DQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPISFPRSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALY PFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL >Mature_765_residues MKWLCSVGIAVSLVLQPALADDLFGNHPLTPEARDAFVTDLLKKMTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAI FNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD VSRDPRWGRASEGFGEDTYLTSIMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMS DEYYSKYLPGLIKSGKVTMAELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKN RLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNSVGENGKVLYAKGANVTSDKGIIDFLNQYEEA VKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQGQRDLIAALKATGKPLVLVLMNGRPLALVKE DQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPISFPRSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALY PFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL
Specific function: Unknown
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=765, Percent_Identity=99.2156862745098, Blast_Score=1563, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 83455; Mature: 83455
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWLCSVGIAVSLVLQPALADDLFGNHPLTPEARDAFVTDLLKKMTVDEKIGQLRLISVG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC PDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVF CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCEEE PISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYL EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECEEECCCCCCCCCCCCCCCCHHHH TSIMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCH KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTA HHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCC ADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKSGKVTMAELDDAARHVLNVKYDMGLFN CCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCEEHHHHHHHHHHHEEEEECCCCCC DPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKNRLETLPLKKSATIAVVGPLA CCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC DSKRDVMGSWSAAGVADQSVTVLTGIKNSVGENGKVLYAKGANVTSDKGIIDFLNQYEEA CCCHHHCCCCCCCCCCCCCEEEEECCHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH VKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQGQRDLIAALKA HCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCCCEEECCCCHHHHHHHHHC TGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPISFP CCCCEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEHHEECCCCCCCCCCCCCC RSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSA CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEEEECEEECC PTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL EEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCC >Mature Secondary Structure MKWLCSVGIAVSLVLQPALADDLFGNHPLTPEARDAFVTDLLKKMTVDEKIGQLRLISVG CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEC PDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRLKIPLFFAYDVLHGQRTVF CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCEEE PISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVDVSRDPRWGRASEGFGEDTYL EEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECEEECCCCCCCCCCCCCCCCHHHH TSIMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEGGKEYNTVDMSPQRLFNDYMPPY HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCH KAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQWGFKGITVSDHGAIKELIKHGTA HHCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCCC ADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKSGKVTMAELDDAARHVLNVKYDMGLFN CCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHCCCCEEHHHHHHHHHHHEEEEECCCCCC DPYSHLGPKESDPVDTNAESRLHRKEAREVARESLVLLKNRLETLPLKKSATIAVVGPLA CCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC DSKRDVMGSWSAAGVADQSVTVLTGIKNSVGENGKVLYAKGANVTSDKGIIDFLNQYEEA CCCHHHCCCCCCCCCCCCCEEEEECCHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH VKVDPRSPQEMIDEAVQTAKQSDVVVAVVGEAQGMAHEASSRTDITIPQGQRDLIAALKA HCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHCCCCCCEEECCCCHHHHHHHHHC TGKPLVLVLMNGRPLALVKEDQQADAILETWFAGTEGGNAIADVLFGDYNPSGKLPISFP CCCCEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCEEHHEECCCCCCCCCCCCCC RSVGQIPVYYSHLNTGRPYNADKPNKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSA CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEEEEEECEEECC PTMKRDGKVTASVQVTNTGKREGATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQT CCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEE VSFPIDIEALKFWNQQMKYDAEPGKFNVFIGTDSARVKKGEFELL EEECCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]