Click here to switch to the map view.

The map label for this gene is 30063479

Identifier: 30063479

GI number: 30063479

Start: 2090670

End: 2091029

Strand: Reverse

Name: 30063479

Synonym: S2213

Alternate gene names: NA

Gene position: 2091029-2090670 (Counterclockwise)

Preceding gene: 30063480

Following gene: 30063478

Centisome position: 45.46

GC content: 33.06

Gene sequence:

>360_bases
TTGAATTTTAATTCACGCTTAGAAAGTCGCTATAGCTATGAACTGATGAAGAAAGCAAGTGAATATAGTGAGTTATATGG
AGATAATCTTATCCAATTAGGCTTGGAGGATGGTATTTACTTCTATAAAGGGATGGCAATTGGTGACGTCTTTGGATTAG
CAAGATATAGTGATTGGACTATTAGTAATCCCGAGTGTGAGGTAATCCCACAGGATGATTTAATAGAGAAGATGAAATCT
TTTAATAGTTCGTTTATTGTTATATCTAAACGAAGCTATGCTAATTTTAATCCAGAAAAGTATCCAAAATTCAAAGTTCT
TATGGATACACCCAATGGCATACTTATCGCTATAAAGTAA

Upstream 100 bases:

>100_bases
TTACAAATTACAAGTTGGGACGATATTTTATCCTTGTGTGTATTATTTTTTTTCGGGGCGATCGTTGTATTTTGAATTCA
AATATTTTTATTCTGAATAC

Downstream 100 bases:

>100_bases
GAAGCATGCTGTAACCATATGTATTCCTTGATTAGAAGATGAAAATCACGACGGTTAATAATATAACGGTTAATAGACGG
TTAATAATATAGAAGACAGG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF12X8

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNFNSRLESRYSYELMKKASEYSELYGDNLIQLGLEDGIYFYKGMAIGDVFGLARYSDWTISNPECEVIPQDDLIEKMKS
FNSSFIVISKRSYANFNPEKYPKFKVLMDTPNGILIAIK

Sequences:

>Translated_119_residues
MNFNSRLESRYSYELMKKASEYSELYGDNLIQLGLEDGIYFYKGMAIGDVFGLARYSDWTISNPECEVIPQDDLIEKMKS
FNSSFIVISKRSYANFNPEKYPKFKVLMDTPNGILIAIK
>Mature_119_residues
MNFNSRLESRYSYELMKKASEYSELYGDNLIQLGLEDGIYFYKGMAIGDVFGLARYSDWTISNPECEVIPQDDLIEKMKS
FNSSFIVISKRSYANFNPEKYPKFKVLMDTPNGILIAIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YK9B_SHIFL (P37790)

Other databases:

- EMBL:   X71970
- EMBL:   AE005674
- EMBL:   AE014073
- RefSeq:   NP_837650.1
- EnsemblBacteria:   EBESCT00000086796
- EnsemblBacteria:   EBESCT00000090696
- GeneID:   1078515
- GenomeReviews:   AE005674_GR
- GenomeReviews:   AE014073_GR
- KEGG:   sfx:S2213
- GeneTree:   EBGT00050000014518

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13766; Mature: 13766

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNSRLESRYSYELMKKASEYSELYGDNLIQLGLEDGIYFYKGMAIGDVFGLARYSDWT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHCCCCCC
ISNPECEVIPQDDLIEKMKSFNSSFIVISKRSYANFNPEKYPKFKVLMDTPNGILIAIK
CCCCCCEEECCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEC
>Mature Secondary Structure
MNFNSRLESRYSYELMKKASEYSELYGDNLIQLGLEDGIYFYKGMAIGDVFGLARYSDWT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHCCCCCC
ISNPECEVIPQDDLIEKMKSFNSSFIVISKRSYANFNPEKYPKFKVLMDTPNGILIAIK
CCCCCCEEECCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152