| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yeeE
Identifier: 30063462
GI number: 30063462
Start: 2072951
End: 2074009
Strand: Reverse
Name: yeeE
Synonym: S2195
Alternate gene names: 30063462
Gene position: 2074009-2072951 (Counterclockwise)
Preceding gene: 30063463
Following gene: 30063461
Centisome position: 45.09
GC content: 50.71
Gene sequence:
>1059_bases ATGTTTTCAATGATATTAAGCGGGCTAATTTGTGGTGCTCTGCTGGGATTTGTCATGCAGCGTGGGCGTTTTTGCCTGAC TGGTGGTTTTCGCGATATGTATATCGCGAAAAATAATCGCATGTTTTACGCCTTGCTGATTGCAATTTCGGCACAAAGCG TGGGGGTTTTTGCGTTAATTCAGGCGGGCCTACTGACTTACGAAGCCGGGGCGTTCCCGTGGCTTGGTACTGTTATAGGT GGGTATCTTTTCGGGCTGGGAATTGTTCTGGCGGGTGGATGTGCCACCGGGACCTGGTATCGCGCGGGTGAGGGATTGAT CGGCAGTTGGATCGCGCTTTTCACTTATATGGTGATGAGTGCGGTGATGCGTTCTCCACACGCCAGTGGTTTAAATCAAA CCTTGCAGCACTACACTACTGAACATAACTCTATTGCTGAGACTTTTAATTTGTCTGTGTGGCCGTTGGTTACCGTTTTG CTGGTGATAACGCTCTGGGTGGTGATGAAAGAGTTGAAGAAGCCAAAACTCAAAGTCGCGACCTTACCGCCGCGCCGAAC CGGGATCGCTCATATTCTGTTTGAAAAACGCTGGCATCCCTTTGTCACTGCTGTACTCATCGGTTTGATTGCGCTTTTAG CCTGGCCCCTGAGTGAAGCAACCGGACGCATGTTTGGGTTAGGAGTCACTTCCCCAACGGCCAATATTCTTCAATTTCTG GTCGCGGGTGACGTGAAATACATTAACTGGGGCGTTTTCCTGGTGTTAGGGATCTTCGTGGAGGCATTTATTGCAGCCAA AGCGAGCCGTGAGTTCCGCGTTCGCGCAGCTGATGCACAAACAACATTACGTAGCGGGTTAGGTGGTGTACTGATGGGCT TCGGTGCCAGTATTGCAGGTGGTTGCTCTATCGGTAATGGACTGGTTATGACTGCAATGATGACCTGGCAGGGCTGGATT GGCCTTGTATTTATGATTCTCGGAGTCTGGACTGCGTCCTGGCTTGTGTATGTTCGACCGCAGCGTAAGGCGCGACTGGC AACTGCTGCGGCAAATTAA
Upstream 100 bases:
>100_bases TTAATAACCATTTGTTCTAATTTAGAGAATTTGGTTATTGGTCTGCATTCCACCAGTCATGAAAAATTTCCCCATTAACA TTCATCTGGTTAATTAATTT
Downstream 100 bases:
>100_bases GTAAGGTGTAAAGATGGCGATTAAAAAGCTGGATGTGGTGACGCAGGTCTGTCCGTTTCCACTCATAGAAGCAAAAGCAG CACTGGCAGAAATGGCCAGC
Product: putative transport system permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIAKNNRMFYALLIAISAQSVGVFALIQAGLLTYEAGAFPWLGTVIG GYLFGLGIVLAGGCATGTWYRAGEGLIGSWIALFTYMVMSAVMRSPHASGLNQTLQHYTTEHNSIAETFNLSVWPLVTVL LVITLWVVMKELKKPKLKVATLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGVTSPTANILQFL VAGDVKYINWGVFLVLGIFVEAFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAGGCSIGNGLVMTAMMTWQGWI GLVFMILGVWTASWLVYVRPQRKARLATAAAN
Sequences:
>Translated_352_residues MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIAKNNRMFYALLIAISAQSVGVFALIQAGLLTYEAGAFPWLGTVIG GYLFGLGIVLAGGCATGTWYRAGEGLIGSWIALFTYMVMSAVMRSPHASGLNQTLQHYTTEHNSIAETFNLSVWPLVTVL LVITLWVVMKELKKPKLKVATLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGVTSPTANILQFL VAGDVKYINWGVFLVLGIFVEAFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAGGCSIGNGLVMTAMMTWQGWI GLVFMILGVWTASWLVYVRPQRKARLATAAAN >Mature_352_residues MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIAKNNRMFYALLIAISAQSVGVFALIQAGLLTYEAGAFPWLGTVIG GYLFGLGIVLAGGCATGTWYRAGEGLIGSWIALFTYMVMSAVMRSPHASGLNQTLQHYTTEHNSIAETFNLSVWPLVTVL LVITLWVVMKELKKPKLKVATLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGVTSPTANILQFL VAGDVKYINWGVFLVLGIFVEAFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAGGCSIGNGLVMTAMMTWQGWI GLVFMILGVWTASWLVYVRPQRKARLATAAAN
Specific function: Unknown
COG id: COG2391
COG function: function code R; Predicted transporter component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0394 family [H]
Homologues:
Organism=Escherichia coli, GI1788323, Length=352, Percent_Identity=97.4431818181818, Blast_Score=689, Evalue=0.0, Organism=Escherichia coli, GI1788238, Length=102, Percent_Identity=41.1764705882353, Blast_Score=78, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007272 [H]
Pfam domain/function: PF04143 DUF395 [H]
EC number: NA
Molecular weight: Translated: 38099; Mature: 38099
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIAKNNRMFYALLIAISAQSVGVFALI CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCEEEHHHHHHHHCCCHHHHHH QAGLLTYEAGAFPWLGTVIGGYLFGLGIVLAGGCATGTWYRAGEGLIGSWIALFTYMVMS HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHH AVMRSPHASGLNQTLQHYTTEHNSIAETFNLSVWPLVTVLLVITLWVVMKELKKPKLKVA HHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE TLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGVTSPTANILQFL ECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHH VAGDVKYINWGVFLVLGIFVEAFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAG HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCHHHHHHCCCCCC GCSIGNGLVMTAMMTWQGWIGLVFMILGVWTASWLVYVRPQRKARLATAAAN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCC >Mature Secondary Structure MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIAKNNRMFYALLIAISAQSVGVFALI CHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCEEEHHHHHHHHCCCHHHHHH QAGLLTYEAGAFPWLGTVIGGYLFGLGIVLAGGCATGTWYRAGEGLIGSWIALFTYMVMS HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHH AVMRSPHASGLNQTLQHYTTEHNSIAETFNLSVWPLVTVLLVITLWVVMKELKKPKLKVA HHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEE TLPPRRTGIAHILFEKRWHPFVTAVLIGLIALLAWPLSEATGRMFGLGVTSPTANILQFL ECCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHH VAGDVKYINWGVFLVLGIFVEAFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAG HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCCHHHHHHCCCCCC GCSIGNGLVMTAMMTWQGWIGLVFMILGVWTASWLVYVRPQRKARLATAAAN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]